| 2022 | AMIA | Documentation dynamics: note composition, burden, and physician efficiency. | Nate C. Apathy, Lisa S. Rotenstein, David W. Bates, A Jay Holmgren |
| 2022 | AMIA | Variation in Use of Electronic Health Records within and Across Organizations. | Dori A. Cross, Nate C. Apathy, A Jay Holmgren |
| 2022 | AMIA | Impact of Patient Access to EHR Notes on Clinician EHR Documentation. | A Jay Holmgren, Nate C. Apathy |
| 2022 | AMIA | Adoption of Advanced IT Functions by Critical Access Hospitals as a Function of Proximity to a Regional Extension Center. | Masha Kuznetsova, Nate C. Apathy, A Jay Holmgren |
| 2022 | AMIA | Ctrl-C: A Cross-Sectional Study of the EHR Usage Patterns of US Oncology Clinicians. | Sumi Sinha, A Jay Holmgren, Julian Hong, Lisa S. Rotenstein |
| 2021 | AMIA | Spillover Effects from the HITECH Act on Innovation in Medical Informatics. | Nate C. Apathy, A Jay Holmgren, Shane Greenstein |
| 2021 | AMIA | The Impact of Quality Feedback and Reporting on Hospital EHR Medication Safety Improvement. | A Jay Holmgren, David W. Bates |
| 2021 | AMIA | Assessing the Impact of COVID-19 on Clinician Electronic Health Record Use. | A Jay Holmgren, N. Lance Downing, Mitchell Tang, Christopher D. Sharp, Christopher A. Longhurst, Robert S. Huckman |
| 2020 | AMIA | Learning by Doing: Resident Physicians' Use of Electronic Health Records. | A Jay Holmgren, Brenessa Lindeman, Eric W. Ford |
| 2019 | AMIA | Building Safer EHRs: Hospital Medication Order Safety Performance. | A Jay Holmgren, Zoe Co, Lisa P. Newmark, Melissa Danforth, David C. Classen, David W. Bates |
| 2018 | AMIA | Tracking National Progress in Hospital Interoperability. | A Jay Holmgren, Julia Adler-Milstein |
| 2017 | AMIA | Advanced Use of EHRs in US Hospitals and the Emergence of a Digital "Use" Divide. | Julia Adler-Milstein, A Jay Holmgren |
| 2016 | AMIA | U.S. Hospitals Engagement in Core Domains of Interoperability. | A Jay Holmgren, Vaishali Patel, Dustin Charles, Julia Adler-Milstein |