| 2025 | CIKM | TANDEM: Temporal Attention-guided Neural Differential Equations for Missingness in Time Series Classification. | Yongkyung Oh, Dongyoung Lim, Sungil Kim, Alex A. T. Bui |
| 2025 | IJCAI | Comprehensive Review of Neural Differential Equations for Time Series Analysis. | YongKyung Oh, Seungsu Kam, Jonghun Lee, Dong-Young Lim, Sungil Kim, Alex A. T. Bui |
| 2022 | AMIA | Capturing Demographic, Health-Related, and Psychosocial Variables in a Standardized Manner: Towards Improving Cancer Screening Adherence. | Yannan Lin, Ruiwen Ding, Ashley Prosper, Denise R. Aberle, Alex A. T. Bui, William Hsu |
| 2020 | AIME | Diagnostic Prediction with Sequence-of-sets Representation Learning for Clinical Events. | Tianran Zhang, Muhao Chen, Alex A. T. Bui |
| 2019 | CVPR | Explainable Hierarchical Semantic Convolutional Neural Network for Lung Cancer Diagnosis. | Shiwen Shen, Simon X. Han, Denise R. Aberle, Alex A. T. Bui, William Hsu |
| 2018 | IJCAI | Generating reward functions using IRL towards individualized cancer screening. | Panayiotis Petousis, Simon X. Han, William Hsu, Alex A. T. Bui |
| 2018 | IJCAI | Generating Reward Functions Using IRL Towards Individualized Cancer Screening. | Panayiotis Petousis, Simon X. Han, William Hsu, Alex A. T. Bui |
| 2017 | AMIA | A Usability Study to Evaluate the Impact of a Novel Automated Brain Tumor Assessment Application. | Edgar A. Rios Piedra, Iren Orosz, Mary Zide, Suzie M. El-Saden, Ricky K. Taira, Alex A. T. Bui, William Hsu |
| 2017 | AMIA | Robust Lung Nodule Classification using 2.5D Convolutional Neural Network. | Shiwen Shen, Alex A. T. Bui, William Hsu |
| 2016 | BSN | HIPAA compliant wireless sensing smartwatch application for the self-management of pediatric asthma. | Anahita Hosseini, Chris M. Buonocore, Sepideh Hashemzadeh, Hannaneh Hojaiji, Haik Kalantarian, Costas Sideris, Alex A. T. Bui, Christine E. King, Majid Sarrafzadeh |
| 2016 | MICCAI | Brain Tumor Segmentation by Variability Characterization of Tumor Boundaries. | Edgar A. Rios Piedra, Benjamin M. Ellingson, Ricky K. Taira, Suzie El-Saden, Alex A. T. Bui, William Hsu |
| 2015 | AMIA | A Continuous Markov Model Approach Using Individual Patient Data to Estimate Mean Sojourn Time of Lung Cancer. | Shiwen Shen, Simon X. Han, Panayiotis Petousis, Frank Meng, William Hsu, Alex A. T. Bui |
| 2015 | AMIA | A Platform for Generating and Validating Breast Risk Models from Clinical Data: Towards Patient-Centered Risk Stratified Screening. | Nova F. Smedley, Ngan Chau, Antonia Petruse, Alex A. T. Bui, Arash Naeim, William Hsu |
| 2014 | AMIA | Predicting Discharge Mortality after Acute Ischemic Stroke Using Balanced Data. | King Chung Ho, William Speier, Suzie El-Saden, David S. Liebeskind, Jeffrey L. Saver, Alex A. T. Bui, Corey W. Arnold |
| 2014 | AMIA | Data Model for Personalized Patient Health Guidelines: An Exploratory Study. | Mary McNamara, Karthik Sarma, Denise R. Aberle, Alex A. T. Bui, Corey W. Arnold |
| 2014 | AMIA | Motivating the Additional Use of External Validity: Examining Transportability in a Model of Glioblastoma Multiforme. | Kyle Singleton, William Speier, Alex A. T. Bui, William Hsu |
| 2013 | AMIA | Leveraging Domain Knowledge to Facilitate Visual Exploration of Large Population Datasets. | William Hsu, Alex A. T. Bui |
| 2012 | AMIA | Comparing Predictive Models of Glioblastoma Multiforme Built Using Multi-Institutional and Local Data Sources. | Kyle Singleton, William Hsu, Alex A. T. Bui |
| 2012 | AMIA | Extracting Relevant Information from Clinical Records: Towards Modeling the Evolution of Intracranial Aneurysms. | Juan Anna Wu, William Hsu, Alex A. T. Bui |
| 2012 | ASPDAC | Platform characterization for Domain-Specific Computing. | Alex A. T. Bui, Kwang-Ting Cheng, Jason Cong, Luminita A. Vese, Yi-Chu Wang, Bo Yuan, Yi Zou |
| 2011 | ISVC | EM+TV Based Reconstruction for Cone-Beam CT with Reduced Radiation. | Ming Yan, Jianwen Chen, Luminita A. Vese, John D. Villasenor, Alex A. T. Bui, Jason Cong |
| 2009 | AMIA | Tracking medication information across medical records. | Juan Eugenio Iglesias, Krupa Rocks, Neda Jahanshad, Enrique Fras-Martnez, Lewellyn P. Andrada, Alex A. T. Bui |
| 2008 | AMIA | A Tool for Improving the Longitudinal Imaging Characterization for Neuro-Oncology Cases. | Ricky K. Taira, Alex A. T. Bui, William Hsu, Vijayaraghavan Bashyam, Shishir Dube, Emily Watt, Lewellyn P. Andrada, Suzie El-Saden, Timothy F. Cloughesy, Hooshang Kangarloo |
| 2008 | AMIA | Evaluation of a Dynamic Bayesian Belief Network to Predict Osteoarthritic Knee Pain Using Data from the Osteoarthritis Initiative. | Emily Watt, Alex A. T. Bui |
| 2007 | AMIA | Automatic Identification & Classification of Surgical Margin Status from Pathology Reports Following Prostate Cancer Surgery. | Leonard W. D'Avolio, Mark S. Litwin, Selwyn O. Rogers Jr., Alex A. T. Bui |
| 2006 | AMIA | A Framework for Visually Querying a Probabilistic Model of Tumor Image Features. | William Hsu, Alex A. T. Bui |
| 2003 | AMIA | Workflow Management of HIS/RIS Textual Documents with PACS Image Studies for Neuroradiology. | Craig A. Morioka, Suzie El-Saden, Gary R. Duckwiler, Qinghua Zou, Rene Ying, Alex A. T. Bui, David B. Johnson, Hooshang Kangarloo |
| 2002 | AMIA | A context-sensitive methodology for automatic episode creation. | Roderick Y. Son, Ricky K. Taira, Alex A. T. Bui, Hooshang Kangarloo, Alfonso F. Cardenas |
| 2002 | AMIA | Identification of patient name references within medical documents using semantic selectional restrictions. | Ricky K. Taira, Alex A. T. Bui, Hooshang Kangarloo |
| 2001 | AMIA | Disease specific intelligent pre-fetch and hanging protocol for diagnostic neuroradiology workstations. | Craig A. Morioka, Daniel J. Valentino, Gary R. Duckwiler, Suzie El-Saden, Usha Sinha, Alex A. T. Bui, Hooshang Kangarloo |
| 1999 | AMIA | TimeLine: A Multimedia, Problem-Centric Visualization of Patient Records. | Alex A. T. Bui, Denise R. Aberle, Jonathan G. Goldin, Michael F. McNitt-Gray, Alfonso F. Cardenas, Eric Kleerup, Osman Ratib |
| 1998 | AMIA | The evolution of an integrated timeline for oncology patient healthcare. | Alex A. T. Bui, Denise R. Aberle, Michael F. McNitt-Gray, Alfonso F. Cardenas, Jonathan G. Goldin |