| 2019 | AMIA | Challenges of deploying Computable Biomedical Knowledge in real-world applications. | Derek Corrigan, Vasa Curcin, Jean-Franois Ethier, Allen J. Flynn, Davide Sottara |
| 2019 | AMIA | Engaging Pharmacists to Crowdsource a Fine-grained Medication Risk Scale: An Initial Measurement Study Using Paired Comparisons of Medications. | Allen J. Flynn, Greg Farris, George Meng, Jack Allan, Sara Kurosu, Natalie Lampa, Koki Sasagawa |
| 2018 | AMIA | ScriptNumerate: A Data-to-Advice Pipeline using Compound Digital Objects to Increase the Interoperability of Computable Biomedical Knowledge. | Allen J. Flynn, Julia Adler-Milstein, Peter Boisvert, Nathaniel Gittlen, Carl Lagoze, George Meng, F. Jacob Seagull, Charles P. Friedman |
| 2018 | AMIA | The Knowledge Grid: Demo of a Platform to Manage and Disseminate Computable Biomedical Knowledge using digital Knowledge Objects. | Allen J. Flynn, Peter Boisvert, Nathaniel Gittlen, Carl Lagoze, George Meng, Charles P. Friedman |
| 2016 | AMIA | Counting Knowledge Objects - Estimating How Many Discrete Knowledge Artifacts are described in the Biomedical Literature by Type. | Allen J. Flynn, Charles P. Friedman |
| 2014 | AMIA | MedMinify: An Advice-giving System for Simplifying the Schedules of Daily Home Medication Regimens Used to Treat Chronic Conditions. | Allen J. Flynn |
| 2013 | AMIA | Taking it Easy - A Needs Analysis for Computer-generated Advice to Simplify Home Medication Regimens. | Allen J. Flynn, Predrag V. Klasnja, Charles P. Friedman |