| 2010 | WSC | Simulating plausible mechanisms for changing hepatic xenobiotic clearance patterns. | Shahab Sheikh-Bahaei, C. Anthony Hunt |
| 2009 | CAINE | In Silico White Blood Cell: A Synthetic Model of Leukocyte Rolling, Activation, and Adhesion During Inflammation. | Jonathan Tang, C. Anthony Hunt |
| 2007 | CAINE | Affects of Surface Detection on Shape and Growth of Model Tumor Spheroids. | Jesse Engelberg, Glen E. P. Ropella, C. Anthony Hunt |
| 2007 | CAINE | Systems Modeling of Alveolar Morphogenesis In Vitro. | Sean H. J. Kim, Sunwoo Park, Wei Yu, Keith E. Mostov, Michael A. Matthay, C. Anthony Hunt |
| 2007 | CAINE | Simulation Processors and Their Collaboration for DEVS Models Integrated with Universal Coupling Specification. | Sunwoo Park, Sean H. J. Kim, C. Anthony Hunt |
| 2007 | CAINE | Tracking Compounds and Their Interactions within In Silico Liver. | Sunwoo Park, Sean H. J. Kim, Glen E. P. Ropella, C. Anthony Hunt |
| 2007 | CAINE | Parameter Estimation via Analysis of Fuzzy Clusters (PEAF): An Algorithm to Estimate Parameters of Agent-Based Models. | Shahab Sheikh-Bahaei, C. Anthony Hunt |
| 2006 | WSC | In silico analogues of epithelial cell growth and morphogenesis. | Sean H. J. Kim, Mark R. Grant, Sunwoo Park, C. Anthony Hunt |
| 2006 | WSC | Prediction of | Shahab Sheikh-Bahaei, C. Anthony Hunt |
| 2001 | CATA | Therapeutic engineering: Models of individual variability in drug systems. | Amina Qutub, Alex Lancaster, C. Anthony Hunt |
| 2001 | CATA | A novel method for visualizing similarity in gene expression and other large datasets. | Sandy Shaw, C. Anthony Hunt |
| 1999 | CATA | Simulating clinical trials. A methodology for validating pharmacodynamic predictions. | C. Anthony Hunt |