| 2025 | CLUSTER | Scaling Deep Learning Molecular Dynamics to 500M Atoms on 4096-Node ARMv8 Clusters. | Qi Du, Feng Wang, Chengkun Wu, Han Wang, Yongpeng Liu, Zhaoyin Zhou, Kenli Li |
| 2023 | HPCC | BioNet+: A Comprehensive Interaction Model of Finding Therapeutics for Diseases with Graph Deep Learning. | Jing-Lun Ma, Yanlong Qiu, Canqun Yang, Chengkun Wu |
| 2022 | CVPR | Deep Anomaly Discovery from Unlabeled Videos via Normality Advantage and Self-Paced Refinement. | Guang Yu, Siqi Wang, Zhiping Cai, Xinwang Liu, Chuanfu Xu, Chengkun Wu |
| 2022 | ICASSP | Stgat-Mad : Spatial-Temporal Graph Attention Network For Multivariate Time Series Anomaly Detection. | Jun Zhan, Siqi Wang, Xiandong Ma, Chengkun Wu, Canqun Yang, Detian Zeng, Shilin Wang |
| 2022 | ICONIP | An Unsupervised Short- and Long-Term Mask Representation for Multivariate Time Series Anomaly Detection. | Qiucheng Miao, Chuanfu Xu, Jun Zhan, Dong Zhu, Chengkun Wu |
| 2021 | ICMV | Joint motion context and clip augmentation for spatio-temporal action detection. | Xurui Ma, Xiang Zhang, Chengkun Wu, Chuanfu Xu, Jie Liu, Zhigang Luo |
| 2021 | PAKDD | AA-LSTM: An Adversarial Autoencoder Joint Model for Prediction of Equipment Remaining Useful Life. | Dong Zhu, Chengkun Wu, Chuanfu Xu, Zhenghua Wang |
| 2019 | HPCC | Parallel Computing for Large-Scale Author Name Disambiguation in MEDLINE. | Anyao Tang, Chengkun Wu, Jie Liu, Wei Wang, Xi Yang, Yuting Xing |
| 2017 | IJCNN | SVRG with adaptive epoch size. | Erxue Min, Yawei Zhao, Jun Long, Chengkun Wu, Kuan Li, Jianping Yin |
| 2016 | PAKDD | Predicting Unknown Interactions Between Known Drugs and Targets via Matrix Completion. | Qing Liao, Naiyang Guan, Chengkun Wu, Qian Zhang |
| 2015 | CCGRID | mAMBER: Accelerating Explicit Solvent Molecular Dynamic with Intel Xeon Phi Many-Integrated Core Coprocessors. | Xin Liu, Shaoliang Peng, Canqun Yang, Chengkun Wu, Haiqiang Wang, Qian Cheng, Weiliang Zhu, Jinan Wang |
| 2015 | CCGRID | The Challenge of Scaling Genome Big Data Analysis Software on TH-2 Supercomputer. | Shaoliang Peng, Xiangke Liao, Canqun Yang, Yutong Lu, Jie Liu, Yingbo Cui, Heng Wang, Chengkun Wu, Bingqiang Wang |
| 2015 | CCGRID | A Method to Accelerate GROMACS in Offload Mode on Tianhe-2 Supercomputer. | Haiqiang Wang, Shaoliang Peng, Xiaoqian Zhu, Chengkun Wu, Xin Liu, Qian Chen, Weiliang Zhu, Jinan Wang, Huaiyu Yang |
| 2011 | MDAI | A Parallel Fusion Method for Heterogeneous Multi-sensor Transportation Data. | Yingjie Xia, Chengkun Wu, Qing-Jie Kong, Zhenyu Shan, Li Kuang |