| 2009 | SOSP | Heat-ray: combating identity snowball attacks using machinelearning, combinatorial optimization and attack graphs. | John Dunagan, Alice X. Zheng, Daniel R. Simon |
| 2008 | NSDI | Characterizing Botnets from Email Spam Records. | Li Zhuang, John Dunagan, Daniel R. Simon, Helen J. Wang, Ivan Osipkov, J. Doug Tygar |
| 2007 | EuroSys | Authorizing applications in singularity. | Ted Wobber, Aydan R. Yumerefendi, Martn Abadi, Andrew Birrell, Daniel R. Simon |
| 2007 | FC | An Evaluation of Extended Validation and Picture-in-Picture Phishing Attacks. | Collin Jackson, Daniel R. Simon, Desney S. Tan, Adam Barth |
| 2007 | NSDI | AS-Based Accountability as a Cost-Effective DDoS Defense. | Daniel R. Simon, Sharad Agarwal, David A. Maltz |
| 2004 | SIGCOMM | Shield: vulnerability-driven network filters for preventing known vulnerability exploits. | Helen J. Wang, Chuanxiong Guo, Daniel R. Simon, Alf Zugenmaier |
| 2003 | DSN | Persistent-State Checkpoint Comparison for Troubleshooting Configuration Failures. | Yi-Min Wang, Chad Verbowski, Daniel R. Simon |
| 2002 | SP | Statistical Identification of Encrypted Web Browsing Traffic. | Qixiang Sun, Daniel R. Simon, Yi-Min Wang, Wilf Russell, Venkata N. Padmanabhan, Lili Qiu |
| 2001 | ACSAC | Practical Automated Filter Generation to Explicitly Enforce Implicit Input Assumptions. | Valentin Razmov, Daniel R. Simon |
| 1999 | FOCS | Limits on the Efficiency of One-Way Permutation-Based Hash Functions. | Jeong Han Kim, Daniel R. Simon, Prasad Tetali |
| 1998 | EuroCrypt | Finding Collisions on a One-Way Street: Can Secure Hash Functions Be Based on General Assumptions? | Daniel R. Simon |
| 1997 | FC | GUMP: Grand Unified Meta-Protocols Recipes for Simple, Standards-Based Financial Cryptography. | Barbara Fox, Brian Beckman, Daniel R. Simon |
| 1996 | CRYPTO | Anonymous Communication and Anonymous Cash. | Daniel R. Simon |
| 1994 | FOCS | On the Power of Quantum Computation | Daniel R. Simon |
| 1993 | STOC | Cryptographic defense against traffic analysis. | Charles Rackoff, Daniel R. Simon |
| 1991 | CRYPTO | Non-Interactive Zero-Knowledge Proof of Knowledge and Chosen Ciphertext Attack. | Charles Rackoff, Daniel R. Simon |