| 2024 | MICCAI | 🐍 LKM-UNet: Large Kernel Vision Mamba UNet for Medical Image Segmentation. | Jinhong Wang, Jintai Chen, Danny Ziyi Chen, Jian Wu |
| 2020 | CBMS | InTracker: An Integrated Detector-Tracker Framework for Cell Detection and Tracking. | Peixian Liang, Jianxu Chen, Yizhe Zhang, Hongxiao Wang, Hao Zheng, Pengfei Gu, Danny Ziyi Chen |
| 2020 | CBMS | A Coarse-to-Fine Data Generation Method for 2D and 3D Cell Nucleus Segmentation. | Zhuo Zhao, Hongxiao Wang, Yizhe Zhang, Hao Zheng, Siyuan Zhang, Danny Ziyi Chen |
| 2015 | HPDC | Monte Carlo Based Ray Tracing in CPU-GPU Heterogeneous Systems and Applications in Radiation Therapy. | Kai Xiao, Danny Ziyi Chen, Xiaobo Sharon Hu, Bo Zhou |
| 2014 | CBMS | An Automated Approach for Fibrin Network Segmentation and Structure Identification in 3D Confocal Microscopy Images. | Jianxu Chen, Oleg V. Kim, Rustem I. Litvinov, John W. Weisel, Mark S. Alber, Danny Ziyi Chen |
| 2014 | MICCAI | A Matching Model Based on Earth Mover's Distance for Tracking Myxococcus Xanthus. | Jianxu Chen, Cameron W. Harvey, Mark S. Alber, Danny Ziyi Chen |
| 2013 | ESA | Shell: A Spatial Decomposition Data Structure for 3D Curve Traversal on Many-Core Architectures. | Kai Xiao, Danny Ziyi Chen, Xiaobo Sharon Hu, Bo Zhou |