| 2026 | SENSYS | Poster Abstract: Physiology-Aware Foundation Models for Robust and Interpretable EEG Sensing. | Zarina Maksudova, Denis Shestakov, Ilia Semenkov, Anastasia Bernovek, Ilya Makarov, Alex Ossadtchi |
| 2013 | CBMI | Scalable high-dimensional indexing with Hadoop. | Denis Shestakov, Diana Moise, Gylfi Thor Gudmunsson, Laurent Amsaleg |
| 2013 | ICWE | Current Challenges in Web Crawling. | Denis Shestakov |
| 2012 | ICWE | XFormsDB: A Declarative Web Application Framework. | Markku Laine, Denis Shestakov, Petri Vuorimaa |
| 2012 | SAC | Extending XForms with server-side functionality. | Markku Laine, Denis Shestakov, Petri Vuorimaa |
| 2011 | DEXA | Sampling the National Deep Web. | Denis Shestakov |
| 2011 | IDEAS | Databases on the web: national web domain survey. | Denis Shestakov |
| 2010 | APWEB | Host-IP Clustering Technique for Deep Web Characterization. | Denis Shestakov, Tapio Salakoski |
| 2010 | SAC | Host-IP clustering technique for deep web characterization. | Denis Shestakov, Tapio Salakoski |
| 2007 | DEXA | On Estimating the Scale of National Deep Web. | Denis Shestakov, Tapio Salakoski |