| 2026 | RC | Reversible Deep Learning for | Stefan Kuhn, Vandana Dwarka, Przemyslaw Grenda, Eero Vainikko |
| 2025 | RC | Implementing Reversible Neural Networks. | Uku Zingel, Stefan Kuhn, Eero Vainikko |
| 2022 | ICISSP | Privacy-preserving Parallel Computation of Shortest Path Algorithms with Low Round Complexity. | Mohammad Anagreh, Peeter Laud, Eero Vainikko |
| 2021 | ICISSP | Parallel Privacy-preserving Computation of Minimum Spanning Trees. | Mohammad Anagreh, Eero Vainikko, Peeter Laud |
| 2021 | PDP | Parallel Privacy-Preserving Shortest Paths by Radius-Stepping. | Mohammad Anagreh, Eero Vainikko, Peeter Laud |
| 2020 | ICISSP | Speeding Up the Computation of Elliptic Curve Scalar Multiplication based on CRT and DRM. | Mohammad Anagreh, Eero Vainikko, Peeter Laud |
| 2019 | ICISSP | Accelerate Performance for Elliptic Curve Scalar Multiplication based on NAF by Parallel Computing. | Mohammad Anagreh, Eero Vainikko, Peeter Laud |
| 2015 | SIGUCCS | Open Source Platform for Teaching Administration of Unix-like Systems. | Dmitri Danilov, Artjom Lind, Eero Vainikko |
| 2013 | CIKM | Search excavator: the knowledge discovery tool. | Dmitri Danilov, Eero Vainikko |
| 2011 | SAC | Search-logger analyzing exploratory search tasks. | Georg Singer, Ulrich Norbisrath, Eero Vainikko, Hannu Kikkas, Dirk Lewandowski |
| 2010 | CCGRID | SciCloud: Scientific Computing on the Cloud. | Satish Narayana Srirama, Oleg Batrashev, Eero Vainikko |
| 2009 | ICIW | DougFlow Offering Scientific Applications via Web Services. | Christian Pcher, Oleg Batrashev, Ulrich Norbisrath, Eero Vainikko |
| 2008 | ICIW | Friend-to-Friend Computing - Instant Messaging Based Spontaneous Desktop Grid. | Ulrich Norbisrath, Keio Kraaner, Eero Vainikko, Oleg Batrashev |
| 2002 | EuroPar | Parallel Iterative Methods for Navier-Stokes Equations and Application to Stability Assessment (Distinguished Paper). | Ivan G. Graham, Alastair Spence, Eero Vainikko |
| 2002 | ICCS | Remote Access and Scheduling for Parallel Applications on Distributed Systems. | M. Tehver, Eero Vainikko, K. Skaburskas, J. Vedru |