| 2016 | CEC | Neutral space analysis of gene regulatory network models of salt stress response in Arabidopsis using evolutionary computation. | Gonzalo A. Ruz, Tania Timmermann, Eric Goles Ch. |
| 2014 | CIBCB | Neutral graph of regulatory Boolean networks using evolutionary computation. | Gonzalo A. Ruz, Eric Goles Ch. |
| 2012 | CIBCB | Reconstruction and update robustness of the mammalian cell cycle network. | Gonzalo A. Ruz, Eric Goles Ch. |
| 2012 | ICMLA | Building Synthetic Networks of the Budding Yeast Cell-Cycle Using Swarm Intelligence. | Gonzalo A. Ruz, Tania Timmermann, Eric Goles Ch. |
| 2010 | ICMLA | Learning Gene Regulatory Networks with Predefined Attractors for Sequential Updating Schemes Using Simulated Annealing. | Gonzalo A. Ruz, Eric Goles Ch. |
| 2009 | AINA | Loss of Linearity and Symmetrisation in Regulatory Networks. | Jacques Demongeot, Eric Goles Ch., Sylvain Sen |
| 2008 | ISAAC | Understanding a Non-trivial Cellular Automaton by Finding Its Simplest Underlying Communication Protocol. | Eric Goles Ch., Cedric Little, Ivan Rapaport |
| 2001 | STACS | Generalized Langton's Ant: Dynamical Behavior and Complexity. | Anah Gajardo, Eric Goles Ch., Andrs Moreira |
| 1995 | ICALP | A Characterization of the Existence of Energies for Neural Networks. | Michel Cosnard, Eric Goles Ch. |
| 1995 | LATIN | Cyclic Automata Networks on Finite Graphs. | Martn Matamala, Eric Goles Ch. |
| 1992 | LATIN | Dynamics of Sand-Piles Games on Graphs. | Eric Goles Ch., Marcos A. Kiwi |