| 2012 | IC3K | Finite Belief Fusion Model for Hidden Source Behavior Change Detection. | Eugene Santos Jr., Qi Gu, Eunice E. Santos, John Korah |
| 2012 | SAC | Multi-agent framework for real-time processing of large and dynamic search spaces. | John Korah, Eunice E. Santos, Eugene Santos Jr. |
| 2011 | FlAIRS | Tuning a Bayesian Knowledge Base. | Eugene Santos, Qi Gu, Eunice E. Santos |
| 2011 | SMC | Incomplete information and Bayesian Knowledge-Bases. | Eugene Santos, Qi Gu, Eunice E. Santos |
| 2011 | SMC | Modeling complex social scenarios using Culturally Infused Social Networks. | Eunice E. Santos, Eugene Santos, John Thomas Wilkinson, John Korah, Keum Joo Kim, Deqing Li, Fei Yu |
| 2009 | FlAIRS | Bayesian Knowledge Fusion. | Eugene Santos Jr., John Thomas Wilkinson, Eunice E. Santos |
| 2009 | SMC | On a Framework for the Prediction and Explanation of Changing Opinions. | Eunice E. Santos, Eugene Santos Jr., John Thomas Wilkinson, Huadong Xia |
| 2008 | SMC | An anytime-anywhere approach for maximal clique enumeration in social network analysis. | Long Pan, Eunice E. Santos |
| 2007 | SMC | Adaptivity modeling for complex adaptive systems with application to biology. | Donghang Guo, Eunice E. Santos, Ankit Singhal, Eugene Santos Jr., Qunhua Zhao |
| 2006 | PDPTA | A Framework for Complex Adaptive Systems. | Eunice E. Santos, Donghang Guo, Eugene Santos Jr., Qunhua Zhao, Ankit Singhal |
| 2006 | SMC | An Effective Anytime Anywhere Parallel Approach for Centrality Measurements in Social Network Analysis. | Eunice E. Santos, Long Pan, Dustin Lockhart Arendt, Morgan Pittkin |
| 2004 | BIBE | Reducing the Computational Load of Energy Evaluations for Protein Folding. | Eunice E. Santos, Eugene Santos Jr. |
| 2004 | PDPTA | On Simulating Hierarchical Clusters for Performance of Ising Spin Systems. | Gayathri Muthukrishnan, Eunice E. Santos |
| 2004 | PDPTA | A Multi-Agent System Environment for Modelling Cell and Tissue Biology. | Eunice E. Santos, Donghang Guo, Eugene Santos Jr., William Onesty |
| 2004 | PDPTA | Designing Matrix Multiplication Algorithms on a Multi-tier Cluster. | Eunice E. Santos, John Korah |
| 2003 | GECCO | Effective Search of the Energy Landscape for Protein Folding. | Eugene Santos Jr., Keum Joo Kim, Eunice E. Santos |
| 2003 | PDPTA | Solvers for Triangular Systems on k-Dimensional Torus Networks. | Eunice E. Santos, Eugene S. Santos |
| 2002 | PDPTA | Solving Banded Triangular Linear Systems on 3-D Torus Networks. | Eunice E. Santos, Eugene S. Santos, Eugene Santos Jr. |
| 2000 | FlAIRS | Cache Diversity in Genetic Algorithm Design. | Eunice E. Santos, Eugene Santos Jr. |
| 1997 | EuroPar | Optimal Parallel Algorithms for Solving Tridiagonal Linear Systems. | Eunice E. Santos |
| 1997 | PDPTA | Triangular Solvers on a Ring. | Eunice E. Santos |
| 1993 | PPoPP | LogP: Towards a Realistic Model of Parallel Computation. | David E. Culler, Richard M. Karp, David A. Patterson, Abhijit Sahay, Klaus E. Schauser, Eunice E. Santos, Ramesh Subramonian, Thorsten von Eicken |
| 1993 | SPAA | Optimal Broadcast and Summation in the LogP Model. | Richard M. Karp, Abhijit Sahay, Eunice E. Santos, Klaus E. Schauser |