| 2016 | ER | Data Quality Problems When Integrating Genomic Information. | Ana Len, Jos Fabin Reyes Romn, Vernica Burriel, Francisco Valverde |
| 2016 | ER | Applying Conceptual Modeling to Better Understand the Human Genome. | Jos Fabin Reyes Romn, Oscar Pastor, Juan Carlos Casamayor, Francisco Valverde |
| 2016 | ICSE | Continuous validation of a modelling tool in an industrial setting. | Francisco Valverde, Oscar Pastor |
| 2014 | CaiSE | Capability-Driven Development of a SOA Platform: A Case Study. | Sergio Espaa, Tania Gonzlez, Janis Grabis, Lauma Jokste, Ral Juanes, Francisco Valverde |
| 2013 | ENASE | Involving End-users in Domain-Specific Languages Development - Experiences from a Bioinformatics SME. | Maria Jos Villanueva, Francisco Valverde, Oscar Pastor |
| 2012 | RCIS | Interoperability for model-driven development: Current state and future challenges. | Giovanni Giachetti, Francisco Valverde, Beatriz Marn |
| 2012 | RCIS | Web 2.0 patterns: A model-driven engineering approach. | Ana Rosa Guzman, Victoria Lpez Clemente, Francisco Valverde, Jos Ignacio Panach |
| 2012 | RCIS | Diagen: A model-based bioinformatic tool for genetic analysis. | Maria Jos Villanueva, Ana Rosa Guzman, Francisco Valverde, Ana M. Levin |
| 2011 | CaiSE | Diagen: A Model-driven Framework for Integrating Bioinformatic Tools. | Maria Jos Villanueva, Francisco Valverde, Ana M. Levin, Oscar Pastor |
| 2011 | CaiSE | Diagen: A Model-Driven Framework for Integrating Bioinformatic Tools. | Maria Jos Villanueva, Francisco Valverde, Ana M. Levin, Oscar Pastor |
| 2010 | CaiSE | Facing the Challenges of Genome Information Systems: A Variation Analysis Prototype. | Ana Maria Martnez, Ainoha Martn, Maria Jos Villanueva, Francisco Valverde, Ana M. Levin, Oscar Pastor |
| 2010 | CaiSE | Facing the Challenges of Genome Information Systems: a Variation Analysis Prototype. | Ana Maria Martnez, Ainoha Martn, Maria Jos Villanueva, Francisco Valverde, Ana M. Levin, Oscar Pastor |
| 2009 | WISE | Facing the Technological Challenges of Web 2.0: A RIA Model-Driven Engineering Approach. | Francisco Valverde, Oscar Pastor |
| 2008 | ER | Improving Automatic UML2 Profile Generation for MDA Industrial Development. | Giovanni Giachetti, Francisco Valverde, Oscar Pastor |
| 2008 | ESEM | Understandability measurement in an early usability evaluation for model-driven development: an empirical study. | Jos Ignacio Panach, Nelly Condori-Fernndez, Francisco Valverde, Nathalie Aquino, Oscar Pastor |
| 2008 | ICWE | Applying Interaction Patterns: Towards a Model-Driven Approach for Rich Internet Applications Development. | Francisco Valverde, Oscar Pastor |
| 2007 | ER | An Abstract Interaction Model for a MDA Software Production Method. | Francisco Valverde, Jos Ignacio Panach, Oscar Pastor |
| 2007 | WISE | Improvement of a Web Engineering Method Through Usability Patterns. | Jos Ignacio Panach, Francisco Valverde, Oscar Pastor |