| 2020 | MICCAI | Vascular Surface Segmentation for Intracranial Aneurysm Isolation and Quantification. | Ziga Bizjak, Bostjan Likar, Franjo Pernus, Ziga Spiclin |
| 2018 | MICCAI | Predicting Nucleus Basalis of Meynert Volume from Compartmental Brain Segmentations. | Hennadii Madan, Rok Berlot, Nicola J. Ray, Franjo Pernus, Ziga Spiclin |
| 2017 | MICCAI | Segmentation of Pathological Spines in CT Images Using a Two-Way CNN and a Collision-Based Model. | Robert Korez, Bostjan Likar, Franjo Pernus, Tomaz Vrtovec |
| 2017 | MICCAI | Benchmarking Quantitative Imaging Biomarker Measurement Methods Without a Gold Standard. | Hennadii Madan, Franjo Pernus, Ziga Spiclin |
| 2016 | ICPR | Automatic cutting plane identification for computer-aided analysis of intracranial aneurysms. | Tim Jerman, Franjo Pernus, Bostjan Likar, Ziga Spiclin, Aichi Chien |
| 2016 | MICCAI | Manual and Computer-Assisted Pedicle Screw Placement Plans: A Quantitative Comparison. | Dejan Knez, Janez Mohar, Robert J. Cirman, Bostjan Likar, Franjo Pernus, Tomaz Vrtovec |
| 2016 | MICCAI | Model-Based Segmentation of Vertebral Bodies from MR Images with 3D CNNs. | Robert Korez, Bostjan Likar, Franjo Pernus, Tomaz Vrtovec |
| 2015 | MICCAI | Combining Unsupervised and Supervised Methods for Lesion Segmentation. | Tim Jerman, Alfiia Galimzianova, Franjo Pernus, Bostjan Likar, Ziga Spiclin |
| 2015 | MICCAI | Computer-Aided Detection and Quantification of Intracranial Aneurysms. | Tim Jerman, Franjo Pernus, Bostjan Likar, Ziga Spiclin |
| 2015 | MICCAI | Automated Pedicle Screw Size and Trajectory Planning by Maximization of Fastening Strength. | Dejan Knez, Bostjan Likar, Franjo Pernus, Tomaz Vrtovec |
| 2015 | MICCAI | Deformable Model-Based Segmentation of Intervertebral Discs from MR Spine Images by Using the SSC Descriptor. | Robert Korez, Bulat Ibragimov, Bostjan Likar, Franjo Pernus, Tomaz Vrtovec |
| 2015 | MVA | Pose estimation of textureless objects in cluttered environments. | Blaz Bratanic, Bostjan Likar, Franjo Pernus, Dejan Tomazevic |
| 2015 | MVA | Automated visual inspection of pharmaceutical tablets in heavily cluttered dynamic environments. | Gregor Podrekar, Blaz Bratanic, Bostjan Likar, Franjo Pernus, Dejan Tomazevic |
| 2013 | MICCAI | Robust Mixture-Parameter Estimation for Unsupervised Segmentation of Brain MR Images. | Alfiia Galimzianova, Ziga Spiclin, Bostjan Likar, Franjo Pernus |
| 2013 | MICCAI | Automatic Detection of Misalignment in Rigid 3D-2D Registration. | Uros Mitrovic, Ziga Spiclin, Bostjan Likar, Franjo Pernus |
| 2013 | MVA | Real-time in-plane rotation estimation of pharmaceutical tablets: a feature based approach. | Blaz Bratanic, Bostjan Likar, Franjo Pernus, Dejan Tomazevic |
| 2012 | MICCAI | Method for 3D-2D Registration of Vascular Images: Application to 3D Contrast Agent Flow Visualization. | Uros Mitrovic, Ziga Spiclin, Bostjan Likar, Franjo Pernus |
| 2011 | MICCAI | Information-Theoretic Multi-modal Image Registration Based on the Improved Fast Gauss Transform: Application to Brain Images. | Ziga Spiclin, Bostjan Likar, Franjo Pernus |
| 2011 | MVA | Optical Character Verification of Print on Pharmaceutical Capsules. | Miha Mozina, Dejan Tomazevic, Franjo Pernus, Bostjan Likar |
| 2010 | ICPR | Automated Tracking of Vesicles in Phase Contrast Microscopy Images. | Peter Usenik, Tomaz Vrtovec, Franjo Pernus, Bostjan Likar |
| 2008 | MICCAI | EEG to MRI Registration Based on Global and Local Similarities of MRI Intensity Distributions. | Ziga Spiclin, Arne Hans, Frank H. Duffy, Simon K. Warfield, Bostjan Likar, Franjo Pernus |
| 2008 | MICCAI | A Symmetry-Based Method for the Determination of Vertebral Rotation in 3D. | Tomaz Vrtovec, Franjo Pernus, Bostjan Likar |
| 2007 | ETFA | Matching images of imprinted tablets. | Ziga Spiclin, Marko Bukovec, Franjo Pernus, Bostjan Likar |
| 2007 | MICCAI | 3D/2D Image Registration: The Impact of X-Ray Views and Their Number. | Dejan Tomazevic, Bostjan Likar, Franjo Pernus |
| 2007 | MVA | Geometrical and Statistical Visual Inspection of Imprinted Tablets. | Marko Bukovec, Ziga Spiclin, Franjo Pernus, Bostjan Likar |
| 2006 | MICCAI | Generation of Curved Planar Reformations from Magnetic Resonance Images of the Spine. | Tomaz Vrtovec, Sbastien Ourselin, Lavier Gomes, Bostjan Likar, Franjo Pernus |
| 2005 | MICCAI | Reconstruction-Based 3D/2D Image Registration. | Dejan Tomazevic, Bostjan Likar, Franjo Pernus |
| 2004 | ICPR | Evaluation of Nine Similarity Measures Used in Rigid Registration. | Darko Skerl, Bostjan Likar, Franjo Pernus |
| 2004 | MICCAI | Multi-feature Intensity Inhomogeneity Correction in MR Images. | Uros Vovk, Franjo Pernus, Bostjan Likar |
| 2002 | MICCAI | "Gold Standard" 2D/3D Registration of X-Ray to CT and MR Images. | Dejan Tomazevic, Bostjan Likar, Franjo Pernus |
| 2001 | MICCAI | Segmenting Articulated Structures by Hierarchical Statistical Modeling of Shape, Appearance, and Topology. | Rok Bernard, Bostjan Likar, Franjo Pernus |
| 2000 | ICPR | A Machine Vision System for Inspecting Bearings. | Joze Derganc, Franjo Pernus |
| 2000 | ICPR | A Comparison of Retrospective Shading Correction Techniques. | Dejan Tomazevic, Bostjan Likar, Franjo Pernus |
| 2000 | MICCAI | Retrospective Correction of MR Intensity Inhomogeneity by Information Minimization. | Bostjan Likar, Max A. Viergever, Franjo Pernus |
| 1999 | CAIP | Modeling Morphological Changes During Contraction of Muscle Fibres by Active Contours. | Ales Klemencic, Franjo Pernus, Stanislav Kovacic |
| 1997 | CAIP | Planning Multiple Views for 3-D Object Recognition and Pose Determination. | Franjo Pernus, Ales Leonardis, Stanislav Kovacic |
| 1996 | ICPR | Segmentation of muscle fibre images using Voronoi diagrams and active contour models. | Ales Klemencic, Franjo Pernus, Stanislav Kovacic |
| 1995 | CAIP | Recognition and Pose Determinatn of 3-D Objects Using Multiple Views. | Ales Leonardis, Stanislav Kovacic, Franjo Pernus |
| 1992 | ICPR | Noninformation-preserving shape features at multiple resolution. | Franjo Pernus, Ales Leonardis, Stanko Kovacic |