| 2016 | IDEAS | Improving GraphChi for Large Graph Processing: Fast Radix Sort in Pre-Processing. | Stuart Thiel, Greg Butler, Larry H. Thiel |
| 2015 | CIBCB | A visual spreadsheet using HTML5 for whole genome display. | Nada Alhirabi, Greg Butler |
| 2015 | CIBCB | On predicting transport proteins and their substrates for the reconstruction of metabolic networks. | Faizah Aplop, Greg Butler |
| 2015 | DASFAA | Accelerating Search of Protein Sequence Databases using CUDA-Enabled GPU. | Lin Cheng, Greg Butler |
| 2013 | CIBCB | The impact of SignalP 4.0 on the prediction of secreted proteins. | Hind Melhem, Xiang Jia Min, Greg Butler |
| 2013 | IUI | An approach to controlling user models and personalization effects in recommender systems. | Fedor Bakalov, Marie-Jean Meurs, Birgitta Knig-Ries, Bahar Sateli, Ren Witte, Greg Butler, Adrian Tsang |
| 2009 | APSEC | Describing Pattern Languages for Checking Design Models. | Bahman Zamani, Greg Butler |
| 2009 | TASE | Merging of Use Case Models: Semantic Foundations. | Stephen C. Barrett, Daniel Sinnig, Patrice Chalin, Greg Butler |
| 2008 | MODELS | A Pattern Language Verifier for Web-Based Enterprise Applications. | Bahman Zamani, Sahar Kayhani, Greg Butler |
| 2008 | SIGGRAPH | A pipeline for 800+ shots. | Greg Butler, Anders Langlands, Hannes Ricklefs |
| 2006 | DASFAA | Query Optimization for a Graph Database with Visual Queries. | Greg Butler, Guang Wang, Yue Wang, Liqian Zou |
| 2005 | APBC | A graph database with visual queries for genomics. | Greg Butler, Guang Wang, Yue Wang, Liqian Zou |
| 2004 | SIGGRAPH | The Lord of the Rings: the visual effects that brought middle earth to the screen. | Matt Aitken, Greg Butler, Dan Lemmon, Eric Saindon, Dana Peters, Guy Williams |
| 2003 | APSEC | Implementing Exception Handling Policies for Workflow Management System. | Jinmiao Li, Yun Mai, Greg Butler |
| 2003 | APSEC | Implementing the PostgreSQL Query Optimizer within the OPT++ Framework. | Ju Wang, Jinmiao Li, Greg Butler |
| 1999 | APSEC | Reusable Strategies for Software Agents via the Subsumption. | Greg Butler, Andrea Gantchev, Peter Grogono |
| 1998 | APSEC | A Reuse Case Perspective on Documenting Frameworks. | Greg Butler, Peter Grogono, Ferhat Khendek |
| 1997 | APSEC | Quality and Reuse in Industrial Software Engineering. | Greg Butler |
| 1997 | APSEC | A Z Specification of Use Cases: A Preliminary Report. | Greg Butler, Peter Grogono, Ferhat Khendek |
| 1986 | ISSAC | Divide-and-conquer in computational group theory. | Greg Butler |