| 2018 | ICAISC | Feature Selection Using Differential Evolution for Unsupervised Image Clustering. | Matheus Gutoski, Manasss Ribeiro, Nelson Marcelo Romero Aquino, Leandro Takeshi F. Hattori, Andr Eugnio Lazzaretti, Heitor Silvrio Lopes |
| 2018 | IJCNN | A Novel Approach to Protein Folding Prediction based on Long Short-Term Memory Networks: A Preliminary Investigation and Analysis. | Leandro Takeshi F. Hattori, Csar Manuel Vargas Bentez, Matheus Gutoski, Nelson Marcelo Romero Aquino, Heitor Silvrio Lopes |
| 2016 | GECCO | An Ecologically-inspired Parallel Approach Applied to the Protein Structure Reconstruction from Contact Maps. | Csar Manuel Vargas Bentez, Rafael Stubs Parpinelli, Heitor Silvrio Lopes |
| 2014 | IDC | Gene Expression Programming for Evolving Two-Dimensional Cellular Automata in a Distributed Environment. | Csar Manuel Vargas Bentez, Wagner Rodrigo Weinert, Heitor Silvrio Lopes |
| 2012 | IDEAL | An Improved ABC Algorithm Approach Using SURF for Face Identification. | Chidambaram Chidambaram, Marlon Subtil Maral, Leyza Baldo Dorini, Hugo Vieira Neto, Heitor Silvrio Lopes |
| 2012 | IDEAL | Population Resizing Using Nonlinear Dynamics in an Ecology-Based Approach. | Rafael Stubs Parpinelli, Heitor Silvrio Lopes |
| 2011 | ICA3PP | Reconfigurable Hardware Computing for Accelerating Protein Folding Simulations Using the Harmony Search Algorithm and the 3D-HP-Side Chain Model. | Csar Manuel Vargas Bentez, Marlon Scalabrin, Heitor Silvrio Lopes, Carlos Raimundo Erig Lima |
| 2010 | IDC | Parallel Artificial Bee Colony Algorithm Approaches for Protein Structure Prediction Using the 3DHP-SC Model. | Csar Manuel Vargas Bentez, Heitor Silvrio Lopes |
| 2010 | SMC | Hierarchical Parallel Genetic Algorithm applied to the three-dimensional HP Side-chain Protein Folding Problem. | Csar Manuel Vargas Bentez, Heitor Silvrio Lopes |
| 2009 | CEC | A parallel genetic algorithm for protein folding prediction using the 3D-HP Side Chain model. | Csar Manuel Vargas Bentez, Heitor Silvrio Lopes |
| 2007 | ISDA | Genetic Programming for Induction of Context-Free Grammars. | Ernesto Rodrigues, Heitor Silvrio Lopes |
| 2006 | HIS | Genetic Programming with Incremental Learning for Grammatical Inference. | Ernesto Rodrigues, Heitor Silvrio Lopes |
| 2006 | SMC | Supply Chain Optimization Using Chaotic Differential Evolution Method. | Leandro dos Santos Coelho, Heitor Silvrio Lopes |
| 2005 | HIS | Particle Swarm Optimization with Fast Local Search for the Blind Traveling Salesman Problem. | Heitor Silvrio Lopes, Leandro dos Santos Coelho |