| 2024 | ICCS | A Robust Network Model for Studying Microbiomes in Precision Agriculture Applications. | Suyeon Kim, Ishwor Thapa, Hesham H. Ali |
| 2024 | ICCS | Threshold Optimization in Constructing Comparative Network Models: A Case Study on Enhancing Laparoscopic Surgical Skill Assessment with Edge Betweenness. | Saiteja Malisetty, Elham Rastegari, Ka-Chun Siu, Hesham H. Ali |
| 2020 | ISCC | A Dynamic Approach for Managing Heterogeneous Wireless Networks in Smart Environments. | Yara Mahfood Haddad, Hesham H. Ali |
| 2013 | ICDM | On Mining Biological Signals Using Correlation Networks. | Kathryn Dempsey, Ishwor Thapa, Claudia Cortes, Zach Eriksen, Dhundy Bastola, Hesham H. Ali |
| 2013 | ICDM | On Identifying and Analyzing Significant Nodes in Protein-Protein Interaction Networks. | Rohan Khazanchi, Kathryn Dempsey, Ishwor Thapa, Hesham H. Ali |
| 2013 | ICDM | A Tolerance Graph Approach for Domain-Specific Assembly of Next Generation Sequencing Data. | Julia Warnke, Hesham H. Ali |
| 2013 | ICDM | Analysis of Incrementally Generated Clusters in Biological Networks Using Graph-Theoretic Filters and Ontology Enrichment. | Sean West, Kathryn Dempsey, Sanjukta Bhowmick, Hesham H. Ali |
| 2012 | ICPP | A Novel Multithreaded Algorithm for Extracting Maximal Chordal Subgraphs. | Mahantesh Halappanavar, John Feo, Kathryn Dempsey, Hesham H. Ali, Sanjukta Bhowmick |
| 2009 | ISTAS | Community wireless networks: Emerging wireless commons for digital inclusion. | Abdelnasser Abdelaal, Hesham H. Ali |
| 2009 | Mobiquitous | RFID-based information system for preventing medical errors. | Jong-Hoon Youn, Hesham H. Ali, Hamid Sharif, Biplav Chhetri |
| 2007 | BIBE | Reducing Folding Scenario Candidates in Pseudoknots Detection Using PLMM_DPSS Algorithm Integrated With Energy Filters. | Xiaolu Huang, Hesham H. Ali |
| 2007 | ISPA | A Robust Scalable Cluster-Based Multi-hop Routing Protocol for Wireless Sensor Networks. | Sudha Mudundi, Hesham H. Ali |
| 2007 | WiMob | WLAN-Based Real-Time Asset Tracking System in Healthcare Environments. | Jong-Hoon Youn, Hesham H. Ali, Hamid Sharif, Jitender S. Deogun, Jason Uher, Steven H. Hinrichs |
| 2006 | EUC | Impact of High-Mobility Radio Jamming in Large-Scale Wireless Sensor Networks. | Chulho Won, Jong-Hoon Youn, Hesham H. Ali |
| 2005 | BIBE | On Clustering Biological Data Using Unsupervised and Semi-Supervised Message Passing. | Huimin Geng, Xutao Deng, Dhundy Bastola, Hesham H. Ali |
| 2005 | BIBE | Protein Motif Searching Through Similar Enriched Parikh Vector Identification. | Xiaolu Huang, Hesham H. Ali, Anguraj Sadanandam, Rakesh K. Singh |
| 2005 | CATA | Predicting Yeast Gene Function Based on Hidden Markov Models. | Xutao Deng, Huimin Geng, Hesham H. Ali |
| 2005 | ICCS | SWAT: A New Spliced Alignment Tool Tailored for Handling More Sequencing Errors. | Yifeng Li, Hesham H. Ali |
| 2005 | ICMLA | A new clustering algorithm using message passing and its applications in analyzing microarray data. | Huimin Geng, Xutao Deng, Hesham H. Ali |
| 2005 | ISCC | HYDRA: A New Approach for Integrating Various Wireless Environments. | Karthik Ramachandra, Hesham H. Ali |
| 2005 | SAC | A new approach for gene prediction using comparative sequence analysis. | Rong Chen, Hesham H. Ali |
| 2004 | CAINE | A New Fast Fault Tolerant Scheduling Approach in Distributed Systems. | Mohana Desiraju, Hesham H. Ali |
| 2004 | CAINE | Adaptive Data Forwarding Techniques for Energy Conservation in Wireless Sensor Networks. | Kavitha Gundappachikkenahalli, Hesham H. Ali |
| 2004 | CAINE | A Common Interval Searching Algorithm for Protein Sequence Comparison. | Xiaolu Huang, Hesham H. Ali |
| 2004 | ISCAS | New graph-based algorithms for partitioning VLSI circuits. | Christopher J. Augeri, Hesham H. Ali |
| 2000 | CATA | A genetic algorithm for channel routing in VLSI design. | Jingsen Zheng, Hesham H. Ali |
| 1992 | SAC | Scheduling interval ordered tasks on multiprocessor architecture. | Hesham H. Ali, Hesham El-Rewini |