| 2015 | ICMV | Three-dimensional assessment of scoliosis based on ultrasound data. | Junhua Zhang, Hongjian Li, Bo Yu |
| 2014 | GECCO | iSYN: de novo drug design with click chemistry support. | Hongjian Li, Kwong-Sak Leung, Chun Ho Chan, Hei Lun Cheung, Man Hon Wong |
| 2014 | IV | iSyn: WebGL-Based Interactive De Novo Drug Design. | Hongjian Li, Kwong-Sak Leung, Chun Ho Chan, Hei Lun Cheung, Man Hon Wong |
| 2012 | CIBCB | idock: A multithreaded virtual screening tool for flexible ligand docking. | Hongjian Li, Kwong-Sak Leung, Man Hon Wong |
| 2011 | IV | Interactive Drug Design in Virtual Reality. | Ching-Man Tse, Hongjian Li, Kwong-Sak Leung, Kin-Hong Lee, Man Hon Wong |
| 2008 | CISIS | The Research of Frame and Key Technologies for Intrusion Detection System in IEEE 802.11-based Wireless Mesh Networks. | Hongjian Li, Ming Xu, Yi Li |
| 2008 | NPC | Parallel Computing in Semiclassical Dynamics Simulation of Photochemical Reactions. | Yusheng Dou, Mingze Bai, Hongjian Li, Hong Tang |
| 2008 | NPC | A Parallel Algorithm for Simulating Photochemical Reaction. | Hongjian Li, Hong Tang, Shixin Sun, Yusheng Dou |