| 2024 | MICCAI | D-CoRP: Differentiable Connectivity Refinement for Functional Brain Networks. | Haoyu Hu, Hongrun Zhang, Chao Li |
| 2024 | MICCAI | Genomics-Guided Representation Learning for Pathologic Pan-Cancer Tumor Microenvironment Subtype Prediction. | Fangliangzi Meng, Hongrun Zhang, Ruodan Yan, Guohui Chuai, Chao Li, Qi Liu |
| 2023 | CVPR | Weakly Supervised Segmentation with Point Annotations for Histopathology Images via Contrast-Based Variational Model. | Hongrun Zhang, Liam Burrows, Yanda Meng, Declan Sculthorpe, Abhik Mukherjee, Sarah E. Coupland, Ke Chen, Yalin Zheng |
| 2022 | CVPR | DTFD-MIL: Double-Tier Feature Distillation Multiple Instance Learning for Histopathology Whole Slide Image Classification. | Hongrun Zhang, Yanda Meng, Yitian Zhao, Yihong Qiao, Xiaoyun Yang, Sarah E. Coupland, Yalin Zheng |
| 2022 | MICCAI | Shape-Aware Weakly/Semi-Supervised Optic Disc and Cup Segmentation with Regional/Marginal Consistency. | Yanda Meng, Xu Chen, Hongrun Zhang, Yitian Zhao, Dongxu Gao, Barbra Hamill, Godhuli Patri, Tunde Peto, Savita Madhusudhan, Yalin Zheng |
| 2021 | BMVC | BI-GCN: Boundary-Aware Input-Dependent Graph Convolution Network for Biomedical Image Segmentation. | Yanda Meng, Hongrun Zhang, Dongxu Gao, Yitian Zhao, Xiaoyun Yang, Xuesheng Qian, Xiaowei Huang, Yalin Zheng |
| 2021 | ICCV | Spatial Uncertainty-Aware Semi-Supervised Crowd Counting. | Yanda Meng, Hongrun Zhang, Yitian Zhao, Xiaoyun Yang, Xuesheng Qian, Xiaowei Huang, Yalin Zheng |