| 2025 | ICCCN | Maximizing Profit With Energy-Efficient 5G Edge Orchestration. | Endri Goshi, Hongyu Guo, Fidan Mehmeti, Wolfgang Kellerer |
| 2025 | ICLR | AssembleFlow: Rigid Flow Matching with Inertial Frames for Molecular Assembly. | Hongyu Guo, Yoshua Bengio, Shengchao Liu |
| 2025 | ICLR | Structure Language Models for Protein Conformation Generation. | Jiarui Lu, Xiaoyin Chen, Stephen Zhewen Lu, Chence Shi, Hongyu Guo, Yoshua Bengio, Jian Tang |
| 2025 | USENIX | MARC: Motion-Aware Rate Control for Mobile E-commerce Cloud Rendering. | Yuankang Zhao, Furong Yang, Gerui Lv, Qinghua Wu, Yanmei Liu, Jiuhai Zhang, Yutang Peng, Feng Peng, Hongyu Guo, Ying Chen, Zhenyu Li, Gaogang Xie |
| 2024 | COLING | MUCH: A Multimodal Corpus Construction for Conversational Humor Recognition Based on Chinese Sitcom. | Hongyu Guo, Wenbo Shang, Xueyao Zhang, Binyang Li |
| 2024 | ICLR | Conversational Drug Editing Using Retrieval and Domain Feedback. | Shengchao Liu, Jiongxiao Wang, Yijin Yang, Chengpeng Wang, Ling Liu, Hongyu Guo, Chaowei Xiao |
| 2024 | MOBICOM | Chorus: Coordinating Mobile Multipath Scheduling and Adaptive Video Streaming. | Gerui Lv, Qinghua Wu, Yanmei Liu, Zhenyu Li, Qingyue Tan, Furong Yang, Wentao Chen, Yunfei Ma, Hongyu Guo, Ying Chen, Gaogang Xie |
| 2024 | NOSSDAV | JitBright: towards Low-Latency Mobile Cloud Rendering through Jitter Buffer Optimization. | Yuankang Zhao, Qinghua Wu, Gerui Lv, Furong Yang, Jiuhai Zhang, Feng Peng, Yanmei Liu, Zhenyu Li, Ying Chen, Hongyu Guo, Gaogang Xie |
| 2024 | NSDI | TECC: Towards Efficient QUIC Tunneling via Collaborative Transmission Control. | Jiaxing Zhang, Furong Yang, Ting Liu, Qinghua Wu, Wu Zhao, Yuanbo Zhang, Wentao Chen, Yanmei Liu, Hongyu Guo, Yunfei Ma, Zhenyu Li |
| 2023 | AAAI | Interpolating Graph Pair to Regularize Graph Classification. | Hongyu Guo, Yongyi Mao |
| 2023 | ICASSP | A Contrastive Framework to Enhance Unsupervised Sentence Representation Learning. | Haoyang Ma, Zeyu Li, Hongyu Guo |
| 2023 | ICLR | Molecular Geometry Pretraining with SE(3)-Invariant Denoising Distance Matching. | Shengchao Liu, Hongyu Guo, Jian Tang |
| 2023 | ICLR | Over-Training with Mixup May Hurt Generalization. | Zixuan Liu, Ziqiao Wang, Hongyu Guo, Yongyi Mao |
| 2023 | ICML | A Group Symmetric Stochastic Differential Equation Model for Molecule Multi-modal Pretraining. | Shengchao Liu, Weitao Du, Zhi-Ming Ma, Hongyu Guo, Jian Tang |
| 2023 | RECOMB | T-Cell Receptor Optimization with Reinforcement Learning and Mutation Polices for Precision Immunotherapy. | Ziqi Chen, Martin Renqiang Min, Hongyu Guo, Chao Cheng, Trevor Clancy, Xia Ning |
| 2022 | ICLR | Pre-training Molecular Graph Representation with 3D Geometry. | Shengchao Liu, Hanchen Wang, Weiyang Liu, Joan Lasenby, Hongyu Guo, Jian Tang |
| 2022 | ICONIP | External Knowledge and Data Augmentation Enhanced Model for Chinese Short Text Matching. | Haoyang Ma, Hongyu Guo |
| 2022 | ICTAI | Using Noise and External Knowledge to Enhance Chinese Pre-trained Model. | Haoyang Ma, Zeyu Li, Hongyu Guo |
| 2022 | KSEM | OTE: An Optimized Chinese Short Text Matching Algorithm Based on External Knowledge. | Haoyang Ma, Zhaoyun Ding, Zeyu Li, Hongyu Guo |
| 2021 | AI | Class-wise Calibration: A Case Study on COVID-19 Hate Speech. | Stephen Obadinma, Hongyu Guo, Xiaodan Zhu |
| 2021 | ICML | Non-Autoregressive Electron Redistribution Modeling for Reaction Prediction. | Hangrui Bi, Hengyi Wang, Chence Shi, Connor W. Coley, Jian Tang, Hongyu Guo |
| 2021 | ICML | Self-supervised Graph-level Representation Learning with Local and Global Structure. | Minghao Xu, Hang Wang, Bingbing Ni, Hongyu Guo, Jian Tang |
| 2021 | UAI | Symmetric Wasserstein autoencoders. | Sun Sun, Hongyu Guo |
| 2020 | AAAI | Nonlinear Mixup: Out-Of-Manifold Data Augmentation for Text Classification. | Hongyu Guo |
| 2020 | AAAI | Aggregated Learning: A Vector-Quantization Approach to Learning Neural Network Classifiers. | Masoumeh Soflaei, Hongyu Guo, Ali Al-Bashabsheh, Yongyi Mao, Richong Zhang |
| 2020 | ICML | A Graph to Graphs Framework for Retrosynthesis Prediction. | Chence Shi, Minkai Xu, Hongyu Guo, Ming Zhang, Jian Tang |
| 2020 | WWW | Dynamic Graph Convolutional Networks for Entity Linking. | Junshuang Wu, Richong Zhang, Yongyi Mao, Hongyu Guo, Masoumeh Soflaei, Jinpeng Huai |
| 2019 | AAAI | MixUp as Locally Linear Out-of-Manifold Regularization. | Hongyu Guo, Yongyi Mao, Richong Zhang |
| 2019 | EMNLP | Uncover the Ground-Truth Relations in Distant Supervision: A Neural Expectation-Maximization Framework. | Junfan Chen, Richong Zhang, Yongyi Mao, Hongyu Guo, Jie Xu |
| 2019 | IJCAI | Learning K-way D-dimensional Discrete Embedding for Hierarchical Data Visualization and Retrieval. | Xiaoyuan Liang, Martin Renqiang Min, Hongyu Guo, Guiling Wang |
| 2019 | IJCAI | Modeling Noisy Hierarchical Types in Fine-Grained Entity Typing: A Content-Based Weighting Approach. | Junshuang Wu, Richong Zhang, Yongyi Mao, Hongyu Guo, Jinpeng Huai |
| 2019 | WWW | A Neural Bag-of-Words Modelling Framework for Link Prediction in Knowledge Bases with Sparse Connectivity. | Fanshuang Kong, Richong Zhang, Hongyu Guo, Samuel Mensah, Zhiyuan Hu, Yongyi Mao |
| 2018 | EMNLP | Syntax Encoding with Application in Authorship Attribution. | Richong Zhang, Zhiyuan Hu, Hongyu Guo, Yongyi Mao |
| 2017 | ACL | A Deep Network with Visual Text Composition Behavior. | Hongyu Guo |
| 2017 | IJCAI | Exemplar-centered Supervised Shallow Parametric Data Embedding. | Martin Renqiang Min, Hongyu Guo, Dongjin Song |
| 2016 | ICDE | Accelerated Continuous Conditional Random Fields for load forecasting. | Hongyu Guo |
| 2016 | NAACL | DAG-Structured Long Short-Term Memory for Semantic Compositionality. | Xiaodan Zhu, Parinaz Sobhani, Hongyu Guo |
| 2015 | ACL | Representation Based Translation Evaluation Metrics. | Boxing Chen, Hongyu Guo |
| 2015 | ICML | Long Short-Term Memory Over Recursive Structures. | Xiaodan Zhu, Parinaz Sobhani, Hongyu Guo |
| 2015 | NAACL | The Unreasonable Effectiveness of Word Representations for Twitter Named Entity Recognition. | Colin Cherry, Hongyu Guo |
| 2014 | ACL | An Empirical Study on the Effect of Negation Words on Sentiment. | Xiaodan Zhu, Hongyu Guo, Saif M. Mohammad, Svetlana Kiritchenko |
| 2011 | IC3K | To Aggregate or Not to Aggregate: That is the Question. | Eric Paquet, Herna L. Viktor, Hongyu Guo |
| 2010 | ICDM | Identifying and Preventing Data Leakage in Multi-relational Classification. | Hongyu Guo, Herna L. Viktor, Eric Paquet |
| 2009 | ICIG | Combining Explicitly Mask Image with Voxel-Based Morphometry for Improving 0.35T Functional MRI Data Analysis. | Ping Yang, Hongyu Guo, Yanfa He |
| 2008 | APWEB | A Framework for Query Capabilities and Interface Design of Mediators on the Gulf of Mexico Data Sources. | Longzhuang Li, John Fernandez, Hongyu Guo |
| 2006 | IJCNN | Multi-view ANNs for Multi-relational Classification. | Hongyu Guo, Herna L. Viktor |
| 2006 | KDD | Mining relational data through correlation-based multiple view validation. | Hongyu Guo, Herna L. Viktor |
| 2005 | MICCAI | 3-D Diffeomorphic Shape Registration on Hippocampal Data Sets. | Hongyu Guo, Anand Rangarajan, Sarang C. Joshi |
| 2004 | CVPR | A New Joint Clustering and Diffeomorphism Estimation Algorithm for Non-Rigid Shape Matching. | Hongyu Guo, Anand Rangarajan, Sarang C. Joshi, Laurent Younes |
| 2004 | SSPR | Multiple Classifier Prediction Improvements against Imbalanced Datasets through Added Synthetic Examples. | Herna L. Viktor, Hongyu Guo |