| 2013 | ACIIDS | Prediction of Mouse Senescence from HE-Stain Liver Images Using an Ensemble SVM Classifier. | Hui-Ling Huang, Ming-Hsin Hsu, Hua-Chin Lee, Phasit Charoenkwan, Shinn-Jang Ho, Shinn-Ying Ho |
| 2013 | CIBCB | Designing predictors of halophilic and non-halophilic proteins using support vector machines. | Hui-Ling Huang, Yerukala Sathipati Srinivasulu, Phasit Charoenkwan, Hua-Chin Lee, Shinn-Ying Ho |
| 2013 | CIBCB | Predicting protein crystallization using a simple scoring card method. | Watshara Shoombuatong, Hui-Ling Huang, Jeerayut Chaijaruwanich, Phasit Charoenkwan, Hua-Chin Lee, Shinn-Ying Ho |
| 2012 | IJCNN | Motion sickness estimation system. | Chin-Teng Lin, Shu-Fang Tsai, Hua-Chin Lee, Hui-Ling Huang, Shinn-Ying Ho, Li-Wei Ko |
| 2008 | CEC | Inferring S-system models of genetic networks from a time-series real data set of gene expression profiles. | Hui-Ling Huang, Kuan-Wei Chen, Shinn-Jang Ho, Shinn-Ying Ho |
| 2007 | CIBCB | Boosting Evolutionary Support Vector Machine for Designing Tumor Classifiers from Microarray Data. | Hui-Ling Huang, Yi-Hsiung Chen, Dwight D. Koeberl, Shinn-Ying Ho |
| 2006 | PAKDD | Scoring Method for Tumor Prediction from Microarray Data Using an Evolutionary Fuzzy Classifier. | Shinn-Ying Ho, Chih-Hung Hsieh, Kuan-Wei Chen, Hui-Ling Huang, Hung-Ming Chen, Shinn-Jang Ho |
| 2005 | CEC | Evolutionary divide-and-conquer approach to inferring S-system models of genetic networks. | Shinn-Ying Ho, Chih-Hung Hsieh, Fu-Chieh Yu, Hui-Ling Huang |
| 2005 | CEC | Efficient gene selection for classification of microarray data. | Shinn-Ying Ho, Chong-Cheng Lee, Hung-Ming Chen, Hui-Ling Huang |
| 2005 | CEC | Flexible protein-ligand docking using particle swarm optimization. | Bo-Fu Liu, Hung-Ming Chen, Hui-Ling Huang, Shiow-Fen Hwang, Shinn-Ying Ho |
| 2001 | CEC | Mesh optimization for surface approximation using an efficient coarse-to-fine evolutionary algorithm. | Hui-Ling Huang, Shinn-Ying Ho |
| 1997 | PDPTA | Combinatorial Properties of Two-Level Hypernet Networks. | Hui-Ling Huang, Gen-Huey Chen |