Isaac S. Kohane
Publication record assembled from the DBLP archive of ranked conferences.
Papers indexed
75
Venues
10
Active years
1993–2021
Best venue rank
A*
Where they publish
Papers
75 indexed papers, newest first.
| Year | Venue | Title | Authors |
|---|---|---|---|
| 2021 | ACL | Attentive Multiview Text Representation for Differential Diagnosis. | Hadi Amiri, Mitra Mohtarami, Isaac S. Kohane |
| 2021 | PSB | Cross-modal representation alignment of molecular structure and perturbation-induced transcriptional profiles. | Samuel G. Finlayson, Matthew B. A. McDermott, Alex V. Pickering, Scott L. Lipnick, Isaac S. Kohane |
| 2020 | AMIA | Deciphering Serous Ovarian Carcinoma Histopathology and Platinum Response by Convolutional Neural Networks. | Kun-Hsing Yu, Vincent Hu, Feiran Wang, Ursula Matulonis, George Mutter, Jeffrey Golden, Isaac S. Kohane |
| 2020 | PSB | Clinical Concept Embeddings Learned from Massive Sources of Multimodal Medical Data. | Andrew L. Beam, Benjamin Kompa, Allen Schmaltz, Inbar Fried, Griffin M. Weber, Nathan P. Palmer, Xu Shi, Tianxi Cai, Isaac S. Kohane |
| 2019 | AMIA | Learning to Estimate Nutrition Facts from Food Descriptions. | Hadi Amiri, Andrew Beam, Isaac S. Kohane |
| 2019 | AMIA | Classifying Non-Small Cell Lung Cancer Histopathology Types and Transcriptomic Subtypes using Convolutional Neural Networks. | Kun-Hsing Yu, Feiran Wang, Gerald J. Berry, Christopher R, Russ B. Altman, Michael Snyder, Isaac S. Kohane |
| 2019 | PSB | Learning Contextual Hierarchical Structure of Medical Concepts with Poincair Embeddings to Clarify Phenotypes. | Brett K. Beaulieu-Jones, Isaac S. Kohane, Andrew L. Beam |
| 2018 | AMIA | High-Throughput Multimodal Automated Phenotyping (MAP) Incorporating Natural Language Processing with Application to PheWAS. | Katherine P. Liao, Jiehuan Sun, Tianrun A. Cai, Nicholas B. Link, Chuan Hong, Jie Huang, Jennifer E. Huffman, Jessica L. Gronsbell, Lauren Costa, Victor M. Castro, Vivian S. Gainer, Shawn N. Murphy, John Michael Gaziano, Kelly Cho, Peter Szolovits, Isaac S. Kohane, Sheng Yu, Tianxi Cai |
| 2017 | AMIA | High-throughput Phenotyping via Denoised Normal Mixture Transformation. | Sheng Yu, Yumeng Ma, Jessica L. Gronsbell, Katherine P. Liao, Tianrun A. Cai, Ashwin N. Ananthakrishnan, Vivian S. Gainer, Susanne E. Churchill, Peter Szolovits, Shawn N. Murphy, Isaac S. Kohane, Tianxi Cai |
| 2017 | AMIA | Subtype Discovery for Autism Spectrum Disorder by Comorbidity Analysis. | Kun-Hsing Yu, Nathan P. Palmer, Isaac S. Kohane |
| 2016 | AMIA | The Spectrum of Insomnia-Associated Comorbidities in an Electronic Medical Records Cohort. | Uri Kartoun, Andrew Beam, Jennifer Pai, Arnaub Chatterjee, Timothy P. Fitzgerald, Isaac S. Kohane, Stanley Y. Shaw |
| 2016 | AMIA | Characterizing the Fever Effect in Autism Spectrum Disorder. | Efrat Muller, Alal Eran, Denis Agniel, Isaac S. Kohane, Eitan Bachmat |
| 2016 | PSB | Session Introduction. | Arjun K. Manrai, Chirag J. Patel, Nils Gehlenborg, Nicholas P. Tatonetti, John P. A. Ioannidis, Isaac S. Kohane |
| 2016 | PSB | Reproducible and Shareable Quantifications of Pathogenicity. | Arjun K. Manrai, Brice L. Wang, Chirag J. Patel, Isaac S. Kohane |
| 2015 | AMIA | Demonstrating the Advantages of Applying Data Mining Techniques on Time-Dependent Electronic Medical Records. | Uri Kartoun, Vishesh Kumar, Su-Chun Cheng, Sheng Yu, Katherine P. Liao, Elizabeth W. Karlson, Ashwin N. Ananthakrishnan, Zongqi Xia, Vivian S. Gainer, Andrew Cagan, Guergana Savova, Pei J. Chen, Shawn N. Murphy, Susanne E. Churchill, Isaac S. Kohane, Peter Szolovits, Tianxi Cai, Stanley Y. Shaw |
| 2014 | AMIA | Smart on FHIR. | David McCallie, Joshua C. Mandel, Stanley M. Huff, Kenneth D. Mandl, Isaac S. Kohane |
| 2014 | AMIA | Informatics for Integrating Biology and the Bedside (I2b2) Clinical Trials (CT) Patient Ascertainment Suite. | Shawn N. Murphy, Nich Wattanasin, Susanne E. Churchill, Isaac S. Kohane, Vivian S. Gainer |
| 2014 | AMIA | Improving the Review of Individual Patients in a Clinical Data Repository. | Nich Wattanasin, Michael Mendis, Kenneth D. Mandl, Isaac S. Kohane, Shawn N. Murphy |
| 2013 | AMIA | Organization and Transformation of Next-Generation Sequencing Data for Use within i2b2. | Lori C. Phillips, Shawn N. Murphy, Isaac S. Kohane |
| 2013 | AMIA | Integrating the CCDA for Real-Time Patient Data in the i2b2 Platform. | Nich Wattanasin, Michael Mendis, Joshua C. Mandel, Rachel B. Ramoni, Kenneth D. Mandl, Isaac S. Kohane, Shawn N. Murphy |
| 2012 | AMIA | Supporting Population Queries and Clinical Trials in i2b2 with SMART. | Shawn N. Murphy, Michael Mendis, Nich Wattanasin, Alyssa Porter, Stella Ubaha, Lori C. Phillips, Joshua C. Mandel, Rachel L. Ramoni, Kenneth D. Mandl, Isaac S. Kohane |
| 2012 | AMIA | Apps to display patient data, making SMART available in the i2b2 platform. | Nich Wattanasin, Alyssa Porter, Stella Ubaha, Michael Mendis, Lori C. Phillips, Joshua C. Mandel, Rachel L. Ramoni, Kenneth D. Mandl, Isaac S. Kohane, Shawn N. Murphy |
| 2012 | AMIA | Integrating Substitutable Medical Apps, Reusable Technologies (SMART) in the i2b2 Platform. | Nich Wattanasin, Alyssa Porter, Stella Ubaha, Michael Mendis, Lori C. Phillips, Joshua C. Mandel, Rachel L. Ramoni, Kenneth D. Mandl, Isaac S. Kohane, Shawn N. Murphy |
| 2009 | CHI | Interacting with eHealth: towards grand challenges for HCI. | m. c. schraefel, Paul Andr, Ryen White, Desney S. Tan, Tim Berners-Lee, Sunny Consolvo, Robert Jacobs, Isaac S. Kohane, Christopher A. Le Dantec, Lena Mamykina, Gary Marsden, Ben Shneiderman, Peter Szolovits, Daniel J. Weitzner |
| 2008 | AMIA | Characterization of Patients who Suffer Asthma Exacerbations using Data Extracted from Electronic Medical Records. | Blanca E. Himes, Isaac S. Kohane, Marco Ramoni, Scott T. Weiss |
| 2007 | AMIA | Architecture of the Open-source Clinical Research Chart from Informatics for Integrating Biology and the Bedside. | Shawn N. Murphy, Michael Mendis, Kristel Hackett, Rajesh Kuttan, Wensong Pan, Lori C. Phillips, Vivian S. Gainer, David Berkowicz, John P. Glaser, Isaac S. Kohane, Henry C. Chueh |
| 2006 | AMIA | Mapping Tool for Maintaining Vocabulary Relationships. | Kristel Hackett, Isaac S. Kohane, Henry C. Chueh, Shawn N. Murphy |
| 2006 | AMIA | Integration of Clinical and Genetic Data in the i2b2 Architecture. | Shawn N. Murphy, Michael Mendis, David A. Berkowitz, Isaac S. Kohane, Henry C. Chueh |
| 2006 | AMIA | Integration of the Personally Controlled Electronic Medical Record into a Regional and Data Exchange: A National Demonstration. | William W. Simons, John D. Halamka, Isaac S. Kohane, Daniel J. Nigrin, Nathan Finstein, Kenneth D. Mandl |
| 2006 | CBMS | Dynamic Bayesian Networks in Modelling Cellular Systems: a Critical Appraisal on Simulated Data. | Fulvia Ferrazzi, Paola Sebastiani, Isaac S. Kohane, Marco Ramoni, Riccardo Bellazzi |
| 2005 | AMIA | Reverse Geocoding: Concerns about Patient Confidentiality in the Display of Geospatial Health Data. | John S. Brownstein, Christopher A. Cassa, Isaac S. Kohane, Kenneth D. Mandl |
| 2005 | AMIA | DITTO - a Tool for Identification of Patient Cohorts from the Text of Physician Notes in the Electronic Medical Record. | Alexander Turchin, Merri L. Pendergrass, Isaac S. Kohane |
| 2003 | AMIA | Localization and Characterization of Mouse-Human Alignments Within the Human Genome. Does Evolutionary Conservation Suggest Functional Importance? | Sunil Saluja, Isaac S. Kohane |
| 2003 | PSB | Human Genome Variation: Haplotypes, Linkage Disequilibrium, and Populations - Session Introduction. | Francisco M. de la Vega, Kenneth K. Kidd, Isaac S. Kohane |
| 2002 | AMIA | Computerized reminders to physicians in the emergency department: a web-based system to report late-arriving abnormal laboratory results. | Zhaohui Cai, Isaac S. Kohane, Gary R. Fleisher, David S. Greenes |
| 2002 | AMIA | Maximizing Data Portability in Patient-controlled Longitudinal Medical Records. | Matvey B. Palchuk, Eric C. Pan, Isaac S. Kohane |
| 2002 | AMIA | Patient-controlled Pediatric Immunization Records. | Eric C. Pan, Isaac S. Kohane, Kenneth D. Mandl |
| 2002 | AMIA | Accessing genomic data through XML-based remote procedure calls. | Alberto Riva, Isaac S. Kohane |
| 2002 | AMIA | An unsupervised self-optimizing gene clustering algorithm. | Asher D. Schachter, Isaac S. Kohane |
| 2002 | AMIA | CHIP TUNER: a web tool for evidence-based noise reduction in gene discovery. | Christine L. Tsien, T. A. Libermann, X. Gu, A. Kho, Isaac S. Kohane |
| 2002 | ISMB | Linking gene expression data with patient survival times using partial least squares. | Peter J. Park, Lu Tian, Isaac S. Kohane |
| 2002 | PSB | Human Genome Variation: Disease, Drug Response, and Clinical Phenotypes - Session Introduction. | Francisco M. de la Vega, Isaac S. Kohane, Julie A. Schneider, J. Claiborne Stephens |
| 2001 | AMIA | A web-based tool to retrieve human genome polymorphisms from public databases. | Alberto Riva, Isaac S. Kohane |
| 2001 | AMIA | Building ICU artifact detection models with more data in less time. | Christine L. Tsien, Isaac S. Kohane, Neil McIntosh |
| 2001 | CEC | Evolution strategy applied to global optimization of clusters in gene expression data of DNA microarrays. | Kwonmoo Lee, Ju Han Kim, Tae Su Chung, Byoung-Sun Moon, Hoseung Lee, Isaac S. Kohane |
| 2001 | PSB | Determining Significant Fold Differences in Gene Expression Analysis. | Atul J. Butte, J. Ye, G. Niederfellner, K. Rett, H. U. Hring, M. F. White, Isaac S. Kohane |
| 2001 | PSB | Unsupervised Learning from Complex Data: The Matrix Incision Tree Algorithm. | Ju-Han Kim, Lucila Ohno-Machado, Isaac S. Kohane |
| 2001 | PSB | On Reporting Fold Differences. | Christine L. Tsien, T. A. Libermann, X. Gu, Isaac S. Kohane |
| 2001 | PSB | Human Genome Variation: Linking Genotypes to Clinical Phenotypes - Session Introduction. | Francisco M. de la Vega, Martin Kreitman, Isaac S. Kohane |
| 2000 | AMIA | Enrolling patients into clinical trials faster using RealTime Recuiting. | Atul J. Butte, David A. Weinstein, Isaac S. Kohane |
| 2000 | AMIA | The new peer review. | Isaac S. Kohane, Russ B. Altman |
| 2000 | AMIA | A Distributed, Secure File System For Personal Medical Records. | Kenneth D. Mandl, Alberto Riva, Isaac S. Kohane |
| 2000 | AMIA | Glucoweb: a case study of secure, remote biomonitoring and communication. | Daniel J. Nigrin, Isaac S. Kohane |
| 2000 | AMIA | First Steps Towards Implementing an International Training Program in Medical Informatics: The Brazil/USA Project. | Lucila Ohno-Machado, Aziz A. Boxwala, Hamish Fraser, Robert A. Greenes, Isaac S. Kohane, Heimar F. Marin, Eduardo P. Marques, Eduardo Massad, Beatriz H. Rocha, Roberto A. Rocha, Laura M. Smeaton, Peter Szolovits |
| 2000 | AMIA | Collating of a Distributed XML-based Medical Records into a Relational Database. | Do Hoon Oh, Alberto Riva, Kenneth D. Mandl, Isaac S. Kohane |
| 2000 | AMIA | Development of a Parent-completed Electronic Interview to Assess Dehydration. | Stephen C. Porter, Gary R. Fleisher, Isaac S. Kohane, Kenneth D. Mandl |
| 1999 | AMIA | Unsupervised knowledge discovery in medical databases using relevance networks. | Atul J. Butte, Isaac S. Kohane |
| 1999 | AMIA | Artifact detection in cardiovascular time series monitoring data from preterm infants. | Cungen Cao, Isaac S. Kohane, Neil McIntosh |
| 1999 | AMIA | Healthconnect: clinical grade patient-physician communication. | Kenneth D. Mandl, Isaac S. Kohane |
| 1999 | AMIA | Scaling a data retrieval and mining application to the enterprise-wide level. | Daniel J. Nigrin, Isaac S. Kohane |
| 1998 | AMIA | ParentLink: A Web-Based Communications Tool for Parents and Pediatricians. | Dilek A. Bishku, Charles J. Homer, Kenneth D. Mandl, Isaac S. Kohane |
| 1998 | AMIA | HealthConnect: A Structured Communication System for Health Management. | Karen L. Bradshaw, Kenneth D. Mandl, Isaac S. Kohane |
| 1998 | AMIA | An Alert System for ED Laboratory Test Results. | Hongmei Dong, David S. Greenes, Gary R. Fleisher, Isaac S. Kohane |
| 1998 | AMIA | Health information identification and de-identification toolkit. | Isaac S. Kohane, Hongmei Dong, Peter Szolovits |
| 1998 | AMIA | Social equity and access to the World Wide Web and E-mail: implications for design and implementation of medical applications. | Kenneth D. Mandl, S. B. Katz, Isaac S. Kohane |
| 1998 | AMIA | Data mining by clinicians. | Daniel J. Nigrin, Isaac S. Kohane |
| 1998 | AMIA | Parental Input into the Emergency Department Medical Record. | Stephen C. Porter, Mary Silvia, Gary R. Fleisher, Isaac S. Kohane, Kenneth D. Mandl |
| 1998 | AMIA | Methodology for Computer-Assisted Prediction of Growth Hormone Deficiency in Children. | Christine L. Tsien, Daniel J. Nigrin, Isaac S. Kohane |
| 1998 | AMIA | Linking multiple heterogeneous data sources to practice guidelines. | F. J. van Wingerde, Yao Sun, Oren Harary, Kenneth D. Mandl, Susanne Salem-Schatz, Charles J. Homer, Isaac S. Kohane |
| 1998 | PAKDD | LRTree: A Hybrid technique for Classifying Myocardial Infarction Data Containing Unknown Attribute Values. | Christine L. Tsien, Hamish S. F. Fraser, Isaac S. Kohane |
| 1997 | AMIA | Confidentiality of Medical Records in the W3-EMRS Project. | David M. Rind, Isaac S. Kohane, Peter Szolovits, Charles Safran, Henry C. Chueh, G. Octo Barnett |
| 1997 | AMIA | A Java-based multi-institutional medical information retrieval system. | Kang Wang, F. J. van Wingerde, Karen L. Bradshaw, Peter Szolovits, Isaac S. Kohane |
| 1993 | AAAI | An Epistemology for Clinically Significant Trends. | Ira J. Haimowitz, Isaac S. Kohane |
| 1993 | CBMS | Integration of intermittent clinical data with continuous data from bedside monitors. | James C. Fackler, Isaac S. Kohane |
| 1993 | IJCAI | Automated Trend Detection with Alternate Temporal Hypotheses. | Ira J. Haimowitz, Isaac S. Kohane |