| 2007 | FlAIRS | Performance Analysis of Evolutionary Search with a Dynamic Restart Policy. | Michael Solano, Istvan Jonyer |
| 2007 | GECCO | Towards an optimal restart strategy for genetic programming. | Michael Solano, Istvan Jonyer |
| 2006 | FlAIRS | Improving Modularity in Genetic Programming Using Graph-Based Data Mining. | Istvan Jonyer, Akiko Himes |
| 2005 | FlAIRS | Source Code Fingerprinting Using Graph Grammar Induction. | Istvan Jonyer, Prach Apiratikul, Johnson P. Thomas |
| 2005 | PPAM | Improving Parallelism in Structural Data Mining. | Min Cai, Istvan Jonyer, Marcin Paprzycki |
| 2004 | PDPTA | Modeling Work Flow in Hierarchically Cluster Distributed Systems. | Austin Gilbert, Johnson P. Thomas, Istvan Jonyer |
| 2003 | FlAIRS | MDL-Based Context-Free Graph Grammar Induction. | Istvan Jonyer, Lawrence B. Holder, Diane J. Cook |
| 2000 | AAAI | Graph-Based Hierarchical Conceptual Clustering in Structural Databases. | Istvan Jonyer, Lawrence B. Holder, Diane J. Cook |
| 2000 | FlAIRS | Graph-Based Hierarchical Conceptual Clustering. | Istvan Jonyer, Lawrence B. Holder, Diane J. Cook |