| 2024 | COLING | Exploring BERT-Based Classification Models for Detecting Phobia Subtypes: A Novel Tweet Dataset and Comparative Analysis. | Anik Das, Milton King, James Alexander Hughes |
| 2023 | CIBCB | Explaining Body Composition After Bariatric Surgery using Accelerometry. | A. T. M. Shakil Ahamed, Ryan E. R. Reid, James Alexander Hughes, Ross E. Andersen |
| 2023 | CIBCB | Effective Vaccination Strategy for Infectious Diseases by Analyzing the Age and Comorbidity Attributes of Individuals on Social Network. | Sumaiya Amin, Derrick G. Lee, James Alexander Hughes |
| 2022 | CIBCB | Assessment of the Relationship Between Physical Behaviours, Psychological Factors, Medication Use, Body Composition and Weight Regain Following Bariatric Surgery. | Fatemeh ZareMehrjardi, Ryan E. R. Reid, Ross E. Andersen, James Alexander Hughes |
| 2021 | CEC | Weighting on the World to Change... an Epidemic. | Rodrigo Vega Jimenez, Michael Dub, Sheridan K. Houghten, James Alexander Hughes |
| 2021 | CIBCB | Vaccinating a Population is a Changing Programming Problem. | Sumaiya Amin, Sheridan K. Houghten, James Alexander Hughes |
| 2021 | CIBCB | Automatic Detection of Necrotizing Fasciitis: A Dataset and Early Results. | Anik Das, Sumaiya Amin, James Alexander Hughes |
| 2021 | CIBCB | Discovering Missing Edges in Drug-Protein Networks: Repurposing Drugs for SARS-CoV-2. | Fatemeh ZareMehrjardi, Athar Omidi, Cristina Sciortino, Ryan E. R. Reid, Ryan Lukeman, James Alexander Hughes, Othman Soufan |
| 2020 | CEC | Gait Model Analysis of Parkinson's Disease Patients under Cognitive Load. | James Alexander Hughes, Sheridan K. Houghten, Joseph Alexander Brown |
| 2020 | CIBCB | Evolving the Curve. | Michael Dub, Sheridan K. Houghten, Daniel A. Ashlock, James Alexander Hughes |
| 2020 | CIBCB | Vaccinating a Population is a Programming Problem. | James Alexander Hughes, Michael Dub, Sheridan K. Houghten, Daniel A. Ashlock |
| 2020 | CIBCB | Using Genetic Programming to Investigate a Novel Model of Resting Energy Expenditure for Bariatric Surgery Patients. | James Alexander Hughes, Ryan E. R. Reid, Sheridan K. Houghten, Ross E. Andersen |
| 2019 | CEC | User and Task Identification of Smartwatch Data with an Ensemble of Nonlinear Symbolic Models. | James Alexander Hughes, Joseph Alexander Brown, Adil Mehmood Khan, Asad Masood Khattak, Mark Daley |
| 2019 | CEC | Generating Nonlinear Models of Functional Connectivity from Functional Magnetic Resonance Imaging Data with Genetic Programming. | James Alexander Hughes, Mark Daley |
| 2019 | CIBCB | Descriptive Symbolic Models of Gaits from Parkinson's Disease Patients. | James Alexander Hughes, Sheridan K. Houghten, Joseph Alexander Brown |
| 2018 | CIBCB | Edit metric decoding: Return of the side effect machines. | Sheridan K. Houghten, Tyler Kennedy Collins, James Alexander Hughes, Joseph Alexander Brown |
| 2018 | CIBCB | Analysis of symbolic models of biometrie data and their use for action and user identification. | James Alexander Hughes, Joseph Alexander Brown, Adil Mehmood Khan, Asad Masood Khattak, Mark Daley |
| 2018 | CIBCB | On the generalizability of linear and non-linear region of interest-based multivariate regression models for fMRI data. | Ethan C. Jackson, James Alexander Hughes, Mark Daley |
| 2017 | CIBCB | Modelling intracranial pressure with noninvasive physiological measures. | James Alexander Hughes, Ethan C. Jackson, Mark Daley |
| 2017 | CIBCB | An algebraic generalization for graph and tensor-based neural networks. | Ethan C. Jackson, James Alexander Hughes, Mark Daley, Michael Winter |
| 2017 | GECCO | Searching for nonlinear relationships in fMRI data with symbolic regression. | James Alexander Hughes, Mark Daley |
| 2016 | CEC | Smartphone gait fingerprinting models via genetic programming. | James Alexander Hughes, Joseph Alexander Brown, Adil Mehmood Khan |
| 2016 | GECCO | Finding Nonlinear Relationships in fMRI Time Series with Symbolic Regression. | James Alexander Hughes, Mark Daley |
| 2014 | CIBCB | Recentering and Restarting Genetic Algorithm variations for DNA Fragment Assembly. | James Alexander Hughes, Sheridan K. Houghten, Guillermo M. Malln-Fullerton, Daniel A. Ashlock |
| 2013 | CEC | Edit metric decoding: Representation strikes back. | James Alexander Hughes, Joseph A. Brown, Sheridan K. Houghten, Daniel A. Ashlock |