| 2024 | FlAIRS | Enhanced Multi-Class Detection of Fake News. | Alen Chih-Yuan Li, Soon Ae Chun, James Geller |
| 2023 | FlAIRS | Multiple View Summarization Framework for Social Media. | Alen Chih-Yuan Li, Soon Ae Chun, James Geller |
| 2022 | FlAIRS | Stemming the Tide of Fake News about the COVID-19 Pandemic. | Alen Chih-Yuan Li, Soon Ae Chun, James Geller |
| 2021 | DATA | Knowledge Graph Analysis of Russian Trolls. | Alen Chih-Yuan Li, Soon Ae Chun, James Geller |
| 2021 | IC3K | Health Ontology for Minority Equity (HOME). | Navya Martin Kollapally, Yan Chen, James Geller |
| 2020 | AMIA | Desiderata for High Quality AMIA Presentation Files. | James Geller, Yarou Ding |
| 2019 | AMIA | Transfer Learning from BERT to Support Insertion of New Concepts into SNOMED CT. | Hao Liu, Yehoshua Perl, James Geller |
| 2019 | AMIA | Training Convolutional Neural Network with Terminology Summarization Data Improves SNOMED CT Enrichment. | Ling Zheng, Hao Liu, Yehoshua Perl, James Geller |
| 2019 | IC3K | Measuring and Avoiding Information Loss During Concept Import from a Source to a Target Ontology. | James Geller, Shmuel T. Klein, Vipina Kuttichi Keloth |
| 2019 | WEBIST | Detecting Political Bias Trolls in Twitter Data. | Soon Ae Chun, Richard D. Holowczak, Kannan Dharan, Ruoyu Wang, Soumyadeep Basu, James Geller |
| 2018 | AMIA | How Sustainable are Biomedical Ontologies? | James Geller, Vipina Kuttichi Keloth, Mark A. Musen |
| 2018 | AMIA | Leveraging Horizontal Density Differences between Ontologies to Identify Missing Child Concepts: A Proof of Concept. | Vipina Kuttichi Keloth, Zhe He, Yan Chen, James Geller |
| 2018 | AMIA | Using Convolutional Neural Networks to Support Insertion of New Concepts into SNOMED CT. | Hao Liu, James Geller, Michael Halper, Yehoshua Perl |
| 2018 | AMIA | Overlapping Complex Concepts Have More Commission Errors, Especially in Intensive Terminology Auditing. | Ling Zheng, Hao Liu, Yehoshua Perl, James Geller, Christopher Ochs, James T. Case |
| 2017 | AMIA | Applications of the Ontology Abstraction Framework. | Christopher Ochs, James Geller, Yehoshua Perl |
| 2017 | ICDE | Enabling Real-Time Drug Abuse Detection in Tweets. | NhatHai Phan, Soon Ae Chun, Manasi Bhole, James Geller |
| 2016 | AMIA | Topological-Pattern-Based Recommendation of UMLS Concepts for National Cancer Institute Thesaurus. | Zhe He, Yan Chen, Sherri de Coronado, Katrina Piskorski, James Geller |
| 2016 | CBMI | UCS: Ultimate course search. | Sheetal Rajgure, Vincent Oria, Krithika Raghavan, Hardik Dasadia, Sai Shashank Devannagari, Reza Curtmola, James Geller, Pierre Gouton, Edina Renfro-Michel, Soon Ae Chun |
| 2015 | AMIA | Drug-drug Interaction Discovery Using Abstraction Networks for "National Drug File - Reference Terminology" Chemical Ingredients. | Christopher Ochs, Ling Zheng, Huanying Gu, Yehoshua Perl, James Geller, Joan Kapusnik-Uner, Aleksandr Zakharchenko |
| 2015 | IC3K | Identifying Pairs of Terms with Strong Semantic Connections in a Textbook Index. | James Geller, Shmuel T. Klein, Yuriy Polyakov |
| 2015 | ICWE | Leveraging Social Data for Health Care Behavior Analytics. | Xiang Ji, Paolo Cappellari, Soon Ae Chun, James Geller |
| 2014 | AMIA | Social InfoButtons for Patient-oriented Healthcare Knowledge Support. | Xiang Ji, James Geller, Soon Ae Chun |
| 2014 | DATA | Developing a Pedagogical Cybersecurity Ontology. | Soon Ae Chun, James Geller |
| 2014 | DATA | A Hybrid Approach to Developing a Cyber Security Ontology. | James Geller, Soon Ae Chun, Arwa M. Wali |
| 2013 | AMIA | A Family-Based Framework for Supporting Quality Assurance of Biomedical Ontologies in BioPortal. | Zhe He, Christopher Ochs, Ankur Agrawal, Yehoshua Perl, Dimitris Zeginis, Konstantinos A. Tarabanis, Gai Elhanan, Michael Halper, Natasha F. Noy, James Geller |
| 2013 | AMIA | Scalability of Abstraction-Network-Based Quality Assurance to Large SNOMED Hierarchies. | Christopher Ochs, Yehoshua Perl, James Geller, Michael Halper, Huanying Helen Gu, Yan Chen, Gai Elhanan |
| 2013 | SIGMOD | Social infobuttons: integrating open health data with social data using semantic technology. | Xiang Ji, Soon Ae Chun, James Geller |
| 2012 | AMIA | Using Gamification and Crowdsourcing to Enhance Terminology Auditing. | David Daudelin, James Geller, Yehoshua Perl |
| 2012 | AMIA | New Abstraction Networks and a New Visualization Tool in Support of Auditing the SNOMED CT Content. | James Geller, Christopher Ochs, Yehoshua Perl, Junchuan Xu |
| 2012 | AMIA | Deriving an Abstraction Network to Support Quality Assurance in OCRe. | Christopher Ochs, Ankur Agrawal, Yehoshua Perl, Michael Halper, Samson W. Tu, Simona Carini, Ida Sim, Natalya Fridman Noy, Mark A. Musen, James Geller |
| 2012 | VLDB | Enhancing the famous people ontology by mining a social network. | Soon Ae Chun, Tian Tian, James Geller |
| 2011 | CaiSE | Enhancing the Interface for Ontology-Supported Homonym Search. | Tian Tian, James Geller, Soon Ae Chun |
| 2010 | ICWE | Improving Web Search Results for Homonyms by Suggesting Completions from an Ontology. | Tian Tian, James Geller, Soon Ae Chun |
| 2009 | AMIA | Comparing Inconsistent Relationship Configurations Indicating UMLS Errors. | James Geller, C. Paul Morrey, Junchuan Xu, Michael Halper, Gai Elhanan, Yehoshua Perl, George Hripcsak |
| 2009 | AMIA | Auditing SNOMED Relationships Using a Converse Abstraction Network. | Duo Helen Wei, Michael Halper, Gai Elhanan, Yan Chen, Yehoshua Perl, James Geller, Kent A. Spackman |
| 2008 | DEXA | Enriching Ontology for Deep Web Search. | Yoo Jung An, Soon Ae Chun, Kuo-Chuan Huang, James Geller |
| 2007 | AMIA | Evaluation of a UMLS Auditing Process of Semantic Type Assignments. | Huanying Gu, George Hripcsak, Yan Chen, C. Paul Morrey, Gai Elhanan, James J. Cimino, James Geller, Yehoshua Perl |
| 2007 | AMIA | Piecewise Synonyms for Enhanced UMLS Source Terminology Integration. | Kuo-Chuan Huang, James Geller, Michael Halper, James J. Cimino |
| 2007 | FlAIRS | Rating the Naturalness of Ontology Taxonomies. | Yoo Jung An, Kuo-Chuan Huang, James Geller |
| 2007 | SAC | Semantic deep web: automatic attribute extraction from the deep web data sources. | Yoo Jung An, James Geller, Yi-Ta Wu, Soon Ae Chun |
| 2007 | SAC | HIS-KCWater: context-aware geospatial data and service integration. | Jejung Lee, Yugyung Lee, Sanket Shah, James Geller |
| 2004 | DASFAA | Ontological and Pragmatic Knowledge Management for Web Service Composition. | Soon Ae Chun, Yugyung Lee, James Geller |
| 2004 | ICWS | Towards Intelligent Web Services for Automating Medical Service Composition. | Yugyung Lee, Chintan Patel, Soon Ae Chun, James Geller |
| 2004 | WWW | Compositional knowledge management for medical services on semantic web. | Yugyung Lee, Chintan Patel, Soon Ae Chun, James Geller |
| 2003 | DaWaK | Using an Interest Ontology for Improved Support in Rule Mining. | Xiaoming Chen, Xuan Zhou, Richard B. Scherl, James Geller |
| 2002 | AMIA | Auditing the UMLS for redundant classifications. | Yi Peng, Michael Halper, Yehoshua Perl, James Geller |
| 2002 | AMIA | Enriching the structure of the UMLS semantic network. | Li Zhang, Yehoshua Perl, Michael Halper, James Geller, James J. Cimino |
| 2001 | AMIA | A metaschema of the UMLS based on a partition of its semantic network. | Michael Halper, Zong Chen, James Geller, Yehoshua Perl |
| 2001 | DS | The Importance of Ownership for E-Commerce. | James Geller, Yehoshua Perl, Li-min Liu, C. Rush, Michael Halper |
| 2001 | FlAIRS | Data Mining with Distributed Agents in E-Commerce Applications. | Yugyung Lee, James Geller, Eun Kyo Park, Changgyu Oh |
| 2000 | AMIA | Partitioning the Semantic Network of the UMLS. | Zong Chen, Michael Halper, James Geller, Yehoshua Perl |
| 2000 | AMIA | How to Partition a Complex Schema of a Medical Terminology. | Huanying Helen Gu, Yehoshua Perl, Michael Halper, James Geller, Feng-shen Kuo, James J. Cimino |
| 1999 | AMIA | Modeling the UMLS using an OODB. | Huanying Gu, Yehoshua Perl, James Geller, Michael Halper, Li-min Liu, James J. Cimino |
| 1999 | DEXA | Using a Similarity Measurement to Partition a Vocabulary of Medical Concepts. | Huanying Gu, James Geller, Li-min Liu, Michael Halper |
| 1998 | AMIA | Converting an integrated hospital formulary into an object-oriented database representation. | Huanying Gu, Li-min Liu, Michael Halper, James Geller, Yehoshua Perl |
| 1997 | AMIA | Partitioning a vocabulary's IS-A hierarchy into trees. | Huanying Gu, Yehoshua Perl, James Geller, Michael Halper, James J. Cimino, Mansnimar Singh |
| 1997 | IJCAI | Challenge: How IJCAI 1999 can Prove Value of AI by Using AI. | James Geller |
| 1996 | CIKM | Modeling a Vocabulary in an Object-Oriented Database. | Li-min Liu, Michael Halper, Huanying Gu, James Geller, Yehoshua Perl |
| 1996 | CoopIS | Identifying a Forest Hierarchy in an OODB Specification Hierarchy Satisfying Disciplined Modeling. | Yehoshua Perl, James Geller, Huanying Gu |
| 1996 | KR | Parallel Transitive Reasoning in Mixed Relational Hierarchies. | Yugyung Lee, James Geller |
| 1994 | CIKM | Integrating a Part Relationship Into an Open OODB System Using Metaclasses. | Michael Halper, James Geller, Yehoshua Perl, Wolfgang Klas |
| 1993 | CIKM | Value Propagation in Object-Oriented Database Part Hierarchies. | Michael Halper, James Geller, Yehoshua Perl |
| 1993 | CIKM | The OODB Path-Method Generator (PMG) Using Precomputed Access Relevance. | Ashish Mehta, James Geller, Yehoshua Perl, Erich J. Neuhold |
| 1992 | ER | "Part" Relations for Object-Oriented Databases. | Michael Halper, James Geller, Yehoshua Perl |
| 1987 | IJCAI | Graphical Deep Knowledge for Intelligent Machine Drafting. | James Geller, Stuart C. Shapiro |
| 1985 | IJCAI | The Teachable Letter Recognizer. | James Geller |