| 2022 | AMIA | Development and preliminary validation of metrics to evaluate data-driven clinical research hypotheses. | Xia Jing, Yuchun Zhou, James J. Cimino, Jay Shubrook, Vimla L. Patel, Sonsoles De Lacalle, Chang Liu |
| 2021 | AMIA | Racial Disparity in Clinical Alert Overrides. | James J. Cimino |
| 2021 | AMIA | Self-Reported Symptoms for COVID-19 Public Health Surveillance: A Window to Social Determinants of Health. | Hope G. Gray, Mohanraj Thirumalai, Wayne H. Liang, James J. Cimino, Sue S. Feldman |
| 2021 | AMIA | A clinical decision support system (CDSS) ontology to facilitate portable vaccination CDSS rules: preliminary results. | Xia Jing, Hua Min, Yang Gong, James J. Cimino, David Robinson, Dean F. Sittig, Paul G. Biondich, Adam Wright, Christian Nhr, Timothy Law, Arild Faxvaag, Akash Indani, Nina C. Hubig, Ronald W. Gimbel, Lior Rennert |
| 2020 | AMIA | Capturing Clinician Reasoning in Electronic Health Records: An Exploratory Study of Under-Treated Essential Hypertension. | James J. Cimino, Heather D. Martin, Tiago K. Colicchio |
| 2020 | AMIA | The anatomy of clinical documentation: an assessment and classification of narrative note sections format and content. | Tiago K. Colicchio, Pavithra I. Dissanayake, James J. Cimino |
| 2020 | AMIA | An Unseen Art: Writing Letters of Support and Nomination to Promote Diversity, Equity, and Inclusion in Informatics. | Tiffany I. Leung, Jessica S. Ancker, James J. Cimino, Hillary Ross, Huanmei Wu |
| 2020 | IRI | Empowering Team Science Across the Translational Spectrum with the UAB Biomedical Research Infrastructure Technology Enhancement (U-BRITE). | James J. Cimino, Wayne H. Liang, Jelai Wang, Dongmei Sun, John David Osborne, Amy Y. Wang, S. Louis Bridges, Matthew C. Wyatt, Jake Y. Chen |
| 2019 | AMIA | A Potential Answer to the Alert Override Riddle: Using Patient Attributes to Predict False Positive Alerts. | Timothy I. Kennell, James J. Cimino |
| 2018 | AMIA | An Exploration of the Terminology of Clinical Cognition and Reasoning. | James J. Cimino, Ziran Li, Chunhua Weng |
| 2018 | AMIA | Improved Visualization of Hierarchical Datasets with VIADS. | Matthew Emerson, Matthew Brooks, David Masters, Jacob Buskirk, Nasseef Abukamail, Chang Liu, James J. Cimino, Jay Shubrook, Xia Jing |
| 2018 | AMIA | Phenotype Detection Registry System (PheDRS) - Implementation of a Generalizable Single Institution Clinical Registry Architecture. | John David Osborne, Adarsh Khare, Donald D. Dempsey, James M. Wells, Matthew C. Wyatt, Geoffrey D. Gordon, Wayne H. Liang, James J. Cimino |
| 2017 | AMIA | Classifying Clinical Trial Eligibility Criteria to Facilitate Phased Cohort Identification Using Clinical Data Repositories. | Amy Y. Wang, William J. Lancaster, Matthew C. Wyatt, Luke V. Rasmussen, Daniel Fort, James J. Cimino |
| 2016 | AMIA | i3b3: Infobuttons for i2b2 as a Mechanism for Investigating the Information Needs of Clinical Researchers. | Timothy Kennell Jr., Donald D. Dempsey, James J. Cimino |
| 2015 | AMIA | Characterization of the Context of Drug Concepts in Research Protocols: An Empiric Study to Guide Ontology Development. | James J. Cimino, Vojtech Huser |
| 2015 | AMIA | ArticlesAboutMe.org: Disseminating Clinical Trials Results to Patients. | Vojtech Huser, Anil Yaman, Chunhua Weng, James J. Cimino |
| 2015 | AMIA | Reproducing a Prospective Clinical Study as a Retrospective Study in MIMIC-II. | Fabrcio S. P. Kury, Vojtech Huser, James J. Cimino |
| 2015 | AMIA | Identifying the Clinical Laboratory Tests from Unspecified "Other Lab Test" Data for Secondary Use. | Xuequn Pan, James J. Cimino |
| 2014 | AMIA | Prior Probability Assessment Wizard. | Amos Cahan, James J. Cimino |
| 2014 | AMIA | Adapting a Clinical Data Repository to ICD-10-CM through the use of a Terminology Repository. | James J. Cimino, Lyuba Remennick |
| 2014 | AMIA | Point-of-Care Knowledge-Based Resource Needs of Clinicians: A Survey from a Large Academic Medical Center. | Marc A. Ellsworth, J. Michael Homan, James J. Cimino, Steve G. Peters, Brian W. Pickering, Vitaly Herasevich |
| 2014 | AMIA | Piloting a Deceased Subject Integrated Data Repository and Protecting Privacy of Relatives. | Vojtech Huser, Mehmet Kayaalp, Zeyno A. Dodd, James J. Cimino |
| 2014 | AMIA | Evaluation studies of the Librarian Infobutton Tailoring Environment (LITE): An open access online knowledge capture, management, and configuration tool for OpenInfobutton. | Xia Jing, James J. Cimino, Guilherme Del Fiol |
| 2014 | AMIA | Automated Phenotype Detection Facilitates Data Warehouse Analysis; an Example Using Structure Query Language and Exudative Pleural Effusion. | John Kimbrough, Vojtech Huser, James J. Cimino |
| 2014 | AMIA | Locating Relevant Patient Information in Electronic Health Record Data Using Representations of Clinical Concepts and Database Structures. | Xuequn Pan, James J. Cimino |
| 2014 | AMIA | Automatic coding of Free-Text Medication Data recorded by Research Coordinators. | Laritza Rodriguez, Vojtech Huser, Olivier Bodenreider, James J. Cimino |
| 2014 | AMIA | Squaring the circle: Managing local healthcare terminologies in the age of standardization. | Titus Schleyer, Daniel J. Vreeman, Mark S. Tuttle, James J. Cimino |
| 2014 | AMIA | Designing a Clinical Dashboard to Fill Information Gaps in the Emergency Department. | Jordan L. Swartz, James J. Cimino, Matthew R. Fred, Robert A. Green, David K. Vawdrey |
| 2013 | AMIA | Practical Choices for Infobutton Customization: Experience from Four Site. | James J. Cimino, Casey Lynnette Overby, Emily Beth Devine, Nathan C. Hulse, Xia Jing, Saverio M. Maviglia, Guilherme Del Fiol |
| 2013 | AMIA | Desiderata for Healthcare Integrated Data Repositories Based on Architectural Comparison of Three Public Repositories. | Vojtech Huser, James J. Cimino |
| 2013 | AMIA | Building a framework for describing the concepts in clinical research informatics research. | Xia Jing, James J. Cimino |
| 2012 | AMIA | Meeting the Electronic Health Record "Meaningful Use" Criterion for the HL7 Infobutton Standard Using OpenInfobutton and the Librarian Infobutton Tailoring Environment (LITE). | James J. Cimino, Xia Jing, Guilherme Del Fiol |
| 2012 | AMIA | ACMI Debate: AMIA Symposium 2012 - Chicago, Illinois. | James J. Cimino, William A. Yasnoff, Latanya Sweeney, John D. Halamka, Mark E. Frisse |
| 2012 | AMIA | Precision and Negative Predictive Value of Links between ClinicalTrials.gov and PubMed. | Vojtech Huser, James J. Cimino |
| 2012 | AMIA | Translational Science on Trialome: Retrolective Study of Publishing Results of Clinical Trials. | Vojtech Huser, James J. Cimino |
| 2009 | AMIA | The Contribution of Observational Studies and Clinical Context Information for Guiding the Integration of Infobuttons into Clinical Information Systems. | James J. Cimino |
| 2009 | AMIA | Use of Clinical Alerting to Improve the Collection of Clinical Research Data. | Krystl Haerian, Jon W. McKeeby, Gary DiPatrizio, James J. Cimino |
| 2008 | AMIA | Leading a Horse to Water: Using Automated Reminders to Increase Use of Online Decision Support. | James J. Cimino, Dmitriy V. Borovtsov |
| 2008 | AMIA | Identifying Logical Clinical Context Clusters in Nursing Orders for the Purpose of Information Retrieval. | Sarah A. Collins, Suzanne Bakken, James J. Cimino, Leanne M. Currie |
| 2008 | AMIA | Extracting Structured Medication Event Information from Discharge Summaries. | Sigfried Gold, Nomie Elhadad, Xinxin Zhu, James J. Cimino, George Hripcsak |
| 2008 | AMIA | Using Semantic and Structural Properties of the UMLS to Discover Potential Terminological Relationships. | Chintan Patel, James J. Cimino |
| 2007 | AMIA | Redesign of the Columbia University Infobutton Manager. | James J. Cimino, Beth E. Friedmann, Kevin M. Jackson, Jianhua Li, Jenia Pevzner, Jesse O. Wrenn |
| 2007 | AMIA | A Methodology for Meeting Context-Specific Information Needs Related to Nursing Orders. | Sarah A. Collins, Suzanne Bakken, James J. Cimino, Leanne M. Currie |
| 2007 | AMIA | Evaluation of a UMLS Auditing Process of Semantic Type Assignments. | Huanying Gu, George Hripcsak, Yan Chen, C. Paul Morrey, Gai Elhanan, James J. Cimino, James Geller, Yehoshua Perl |
| 2007 | AMIA | Piecewise Synonyms for Enhanced UMLS Source Terminology Integration. | Kuo-Chuan Huang, James Geller, Michael Halper, James J. Cimino |
| 2007 | AMIA | Auditing Dynamic Links to Online Information Resources. | Jianhua Li, James J. Cimino |
| 2007 | AMIA | Decompositional Terminology Translation Using Network Analysis. | Chintan Patel, James J. Cimino |
| 2007 | AMIA | A Comparison of Two Methods for Retrieving ICD-9-CM data: The Effect of Using an Ontology-based Method for Handling Terminology Changes. | Alexander C. Yu, James J. Cimino |
| 2006 | AMIA | Reliability of SNOMED-CT Coding by Three Physicians using Two Terminology Browsers. | Michael F. Chiang, John C. Hwang, Alexander C. Yu, Daniel S. Casper, James J. Cimino, Justin Starren |
| 2006 | AMIA | Use, Usability, Usefulness, and Impact of an Infobutton Manager. | James J. Cimino |
| 2006 | AMIA | Interruptions During the Use of a CPOE System for MICU Rounds. | Sarah A. Collins, Leanne M. Currie, Suzanne Bakken, James J. Cimino |
| 2006 | AMIA | Beyond Information Retrieval - Medical Question Answering. | Minsuk Lee, James J. Cimino, Hai Ran Zhu, Carl L. Sable, Vijay Shanker, John W. Ely, Hong Yu |
| 2006 | AMIA | Mining Cross-Terminology Links in the UMLS. | Chintan Patel, James J. Cimino |
| 2005 | AMIA | Using Patient Data to Retrieve Health Knowledge. | James J. Cimino, Mark A. Meyer, Nam-Ju Lee, Suzanne Bakken |
| 2003 | AMIA | The Classification of Clinicians' Information Needs While Using a Clinical Information System. | Mureen Allen, Leanne M. Currie, Mark J. Graham, Suzanne Bakken, Vimla L. Patel, James J. Cimino |
| 2003 | AMIA | Automated Discovery of Patient-Specific Clinician Information Needs Using Clinical Information System Log Files. | Elizabeth S. Chen, James J. Cimino |
| 2003 | AMIA | Automated Identification of Shortcuts to Patient Data for a Wireless Handheld Clinical Information System. | Elizabeth S. Chen, George Hripcsak, Vimla L. Patel, Soumitra Sengupta, Richard J. Gallagher, James J. Cimino |
| 2003 | AMIA | Sharing Infobuttons to Resolve Clinicians' Information Needs. | James J. Cimino, Jianhua Li |
| 2003 | AMIA | Use of Online Resources While Using a Clinical Information System. | James J. Cimino, Jianhua Li, Mark J. Graham, Leanne M. Currie, Mureen Allen, Suzanne Bakken, Vimla L. Patel |
| 2003 | AMIA | Clinical Information Needs in Context: An Observational Study of Clinicians While Using a Clinical Information System. | Leanne M. Currie, Mark J. Graham, Mureen Allen, Suzanne Bakken, Vimla L. Patel, James J. Cimino |
| 2003 | AMIA | Characterizing Information Needs and Cognitive Processes During CIS Use. | Mark J. Graham, Leanne M. Currie, Mureen Allen, Suzanne Bakken, Vimla L. Patel, James J. Cimino |
| 2003 | AMIA | Development of Infobuttons in a Wireless Environment. | Jianbo Lei, Elizabeth S. Chen, Peter D. Stetson, Lawrence K. McKnight, Eneida A. Mendona, James J. Cimino |
| 2003 | PSB | Linking Molecular Imaging Terminology to the Gene Ontology (GO). | P. Karina Tulipano, William S. Millar, James J. Cimino |
| 2002 | ACL | Analyzing the Semantics of patient data to rank records of literature retrieval. | Eneida A. Mendona, Stephen B. Johnson, Yoon-Ho Seol, James J. Cimino |
| 2002 | AMIA | Issues in Developing Clinical Applications for the Wireless Environment. | Elizabeth S. Chen, Lawrence K. McKnight, Peter D. Stetson, James J. Cimino |
| 2002 | AMIA | Theoretical, empirical and practical approaches to resolving the unmet information needs of clinical information system users. | James J. Cimino, Jianhua Li, Suzanne Bakken, Vimla L. Patel |
| 2002 | AMIA | Web-based tailoring and its effect on self-efficacy: results from the MI-HEART randomized controlled trial. | Rita Kukafka, Yves A. Lussier, P. Eng, Vimla L. Patel, James J. Cimino |
| 2002 | AMIA | Improving Clinical Communication with a Virtual Whiteboard. | Lawrence K. McKnight, Peter D. Stetson, Elizabeth S. Chen, James J. Cimino |
| 2002 | AMIA | Using Patient Data to Rank Records of Literature Retrieval. | Eneida A. Mendona, James J. Cimino, Stephen B. Johnson |
| 2002 | AMIA | Knowledge Acquisition of Generic Queries for Information Retrieval. | Yoon-Ho Seol, Stephen B. Johnson, James J. Cimino |
| 2002 | AMIA | Design of a Web-based Care Team Scheduler for PalmCIS. | Peter D. Stetson, Lawrence K. McKnight, Elizabeth S. Chen, James J. Cimino |
| 2002 | AMIA | The cognitive demands of an innovative query user interface. | Di Wang, David R. Kaufman, Eneida A. Mendona, Yoon-Ho Seol, Stephen B. Johnson, James J. Cimino |
| 2002 | AMIA | Enriching the structure of the UMLS semantic network. | Li Zhang, Yehoshua Perl, Michael Halper, James Geller, James J. Cimino |
| 2001 | AMIA | Use of Wireless Technology for Reducing Medical Errors. | Elizabeth S. Chen, James J. Cimino |
| 2001 | AMIA | Integration of nursing assessment concepts into the medical entities dictionary using the LOINC semantic structure as a terminology model. | Bethany J. Cieslowski, David Wajngurt, James J. Cimino, Suzanne Bakken |
| 2001 | AMIA | Battling Scylla and Charybdis: the search for redundancy and ambiguity in the 2001 UMLS metathesaurus. | James J. Cimino |
| 2001 | AMIA | Assessment of Information Needs for Informed, Coordinated Activities in the Clinical Environment. | Tate T. Kubose, James J. Cimino, Vimla L. Patel |
| 2001 | AMIA | The MI-HEART Project: Information Technology (IT) for One-to-One Tailored Patient Communication. | Rita Kukafka, Yves A. Lussier, Vimla L. Patel, James J. Cimino |
| 2001 | AMIA | Harnessing Web Information Technologies for Secure, Adaptive and Individualized Health Communications. | Jianhua Li, Yves A. Lussier, Rita Kukafka, James J. Cimino |
| 2001 | AMIA | MI-HEART: a Comprehensive Management System to Deliver, Monitor and Measure Efficacy of Individualized Web-based Education. | Yves A. Lussier, Rita Kukafka, Jianhua Li, Vimla L. Patel, James J. Cimino |
| 2001 | AMIA | Lessons Learned in the Early Phase of the MI-HEART Clinical Trial. | Yves A. Lussier, Rita Kukafka, Tamiru L. Mammo, Allison Linfante, Vimla L. Patel, James J. Cimino |
| 2001 | AMIA | Perceived information needs and communication difficulties of inpatient physicians and nurses. | Lawrence K. McKnight, Peter D. Stetson, Suzanne Bakken, Christine Curran, James J. Cimino |
| 2001 | AMIA | Content Evaluation of a Knowledge Base. | Eneida A. Mendona, James J. Cimino |
| 2001 | AMIA | Using narrative reports to support a digital library. | Eneida A. Mendona, James J. Cimino, Stephen B. Johnson |
| 2001 | AMIA | Just-in-time Learning in the Emergency Department. | Martin V. Pusic, Wendy A. MacDonald, James J. Cimino |
| 2001 | AMIA | Conceptual Guidance in Information Retrieval. | Yoon-Ho Seol, Stephen B. Johnson, James J. Cimino |
| 2001 | AMIA | Development of an ontology to model medical errors, information needs, and the clinical communication space. | Peter D. Stetson, Lawrence K. McKnight, Suzanne Bakken, Christine Curran, Tate T. Kubose, James J. Cimino |
| 2001 | AMIA | Integrating existing drug formulation terminologies into an HL7 standard classification using OpenGALEN. | Chris Wroe, James J. Cimino, Alan L. Rector |
| 2000 | AMIA | An "infobutton" for enabling patients to interpret on-line Pap smear reports. | David M. Baorto, James J. Cimino |
| 2000 | AMIA | Exploring the Semantic Relations of Radiological Terms using UMLS Resources. | David A. Campbell, Donald P. Harrington, James J. Cimino |
| 2000 | AMIA | A Web-based System For Prediction Of Coronary Heart Disease Risk Using The Framingham Algorithm. | Jen-Hsiang Chuang, Rita Kukafka, Yves A. Lussier, Robert A. Jenders, James J. Cimino |
| 2000 | AMIA | An evaluation of patient access to their electronic medical records via the World Wide Web. | James J. Cimino, Jianhua Li, Eneida A. Mendona, Soumitra Sengupta, Vimla L. Patel, Andre Kushniruk |
| 2000 | AMIA | How to Partition a Complex Schema of a Medical Terminology. | Huanying Helen Gu, Yehoshua Perl, Michael Halper, James Geller, Feng-shen Kuo, James J. Cimino |
| 2000 | AMIA | Developing and Evaluating Theory-based Educational Content for WEB Applications. | Rita Kukafka, Yves A. Lussier, James J. Cimino |
| 2000 | AMIA | Evaluation of Web-based patient information resources: application in the assessment of a patient clinical information system. | Andre Kushniruk, Vimla L. Patel, James J. Cimino |
| 2000 | AMIA | Formal combinations of guidelines: a requirement for self-administered personalized health education. | Yves A. Lussier, Rita Kukafka, Vimla L. Patel, James J. Cimino |
| 2000 | AMIA | Improving the Development of Composite Educational Guidelines Using Decomposition of Concept Lattices. | Yves A. Lussier, Dongwen Wang, Rita Kukafka, James J. Cimino |
| 2000 | AMIA | Automated knowledge extraction from MEDLINE citations. | Eneida A. Mendona, James J. Cimino |
| 1999 | AMIA | Linking Guidelines for Mammography to an Electronic Medical Record for Use by Patients. | Ying Chen, Stephen S. Wang, James J. Cimino |
| 1999 | AMIA | Evaluation of a proposed method for representing drug terminology. | James J. Cimino, Timothy J. McNamara, Terri Meredith, Carol A. Broverman, Karen C. Eckert, Michael Moore, David J. Tyree |
| 1999 | AMIA | Influence of Lay Conceptions of Health and Illness on Health Care Decision-Making: Implications for the Development of Technological Support. | Kayla N. Cytryn, Vimla L. Patel, James J. Cimino |
| 1999 | AMIA | Modeling the UMLS using an OODB. | Huanying Gu, Yehoshua Perl, James Geller, Michael Halper, Li-min Liu, James J. Cimino |
| 1999 | AMIA | WebCIS: large scale deployment of a Web-based clinical information system. | George Hripcsak, James J. Cimino, Soumitra Sengupta |
| 1999 | AMIA | Modeling patient response to acute myocardial infarction: implications for a tailored technology-based program to reduce patient delay. | Rita Kukafka, Yves A. Lussier, Vimla L. Patel, James J. Cimino |
| 1999 | AMIA | Overcoming the Barriers of Web-Based Interventions for Elder Patients: Enabling Strategies for the MI HEART Clinical Trial. | Yves A. Lussier, Rita Kukafka, James J. Cimino |
| 1999 | AMIA | Evaluation of the Information Sources Map. | Eneida A. Mendona, James J. Cimino |
| 1999 | AMIA | Evaluation of a system to identify relevant patient information and its impact on clinical information retrieval. | Qing T. Zeng, James J. Cimino |
| 1998 | AMIA | Architecture for a Web-based clinical information system that keeps the design open and the access closed. | James J. Cimino, Soumitra Sengupta, Paul D. Clayton, Vimla L. Patel, Andre Kushniruk, Xiaoli Huang |
| 1998 | AMIA | Automated Integration of a Diagnostic Decision Support System with a Large Scale Clinical Information System: Aspects of Feasibility. | Gai Elhanan, James J. Cimino |
| 1998 | AMIA | A proposal for incorporating health level seven (HL7) vocabulary in the UMLS Metathesaurus. | Stanley M. Huff, W. Dean Bidgood Jr., James J. Cimino, W. Ed Hammond |
| 1998 | AMIA | Designing Evaluation of Web-Based Information Resources: "Televaluation" of Patient Clinical Information Systems. | Andre Kushniruk, Vimla L. Patel, James J. Cimino |
| 1998 | AMIA | Reproducibility of interpreting "and" and "or" in terminology systems. | Eneida A. Mendona, James J. Cimino, Keith E. Campbell, Kent A. Spackman |
| 1998 | AMIA | Automated knowledge extraction from the UMLS. | Qing T. Zeng, James J. Cimino |
| 1997 | AMIA | Using Logical Observation Identifier Names and Codes (LOINC) to exchange laboratory data among three academic hospitals. | David M. Baorto, James J. Cimino, Curtis A. Parvin, Michael G. Kahn |
| 1997 | AMIA | Supporting infobuttons with terminological knowledge. | James J. Cimino, Gai Elhanan, Qing T. Zeng |
| 1997 | AMIA | Controlled vocabulary and design of laboratory results displays. | Gai Elhanan, James J. Cimino |
| 1997 | AMIA | Partitioning a vocabulary's IS-A hierarchy into trees. | Huanying Gu, Yehoshua Perl, James Geller, Michael Halper, James J. Cimino, Mansnimar Singh |
| 1997 | AMIA | Usability testing in medical informatics: cognitive approaches to evaluation of information systems and user interfaces. | Andre Kushniruk, Vimla L. Patel, James J. Cimino |
| 1997 | AMIA | Linking a clinical system to heterogeneous information resources. | Qing T. Zeng, James J. Cimino |