| 2025 | ICCV | Probabilistic Prototype Calibration of Vision-Language Models for Generalized Few-Shot Semantic Segmentation. | Jie Liu, Jiayi Shen, Pan Zhou, Jan-Jakob Sonke, Efstratios Gavves |
| 2025 | ICLR | CaPo: Cooperative Plan Optimization for Efficient Embodied Multi-Agent Cooperation. | Jie Liu, Pan Zhou, Yingjun Du, Ah-Hwee Tan, Cees G. M. Snoek, Jan-Jakob Sonke, Efstratios Gavves |
| 2025 | ICML | Probabilistic Interactive 3D Segmentation with Hierarchical Neural Processes. | Jie Liu, Pan Zhou, Zehao Xiao, Jiayi Shen, Wenzhe Yin, Jan-Jakob Sonke, Efstratios Gavves |
| 2024 | CVPR | Kandinsky Conformal Prediction: Efficient Calibration of Image Segmentation Algorithms. | Joren Brunekreef, Eric Marcus, Ray Sheombarsing, Jan-Jakob Sonke, Jonas Teuwen |
| 2024 | CVPR | Task-Driven Wavelets Using Constrained Empirical Risk Minimization. | Eric Marcus, Ray Sheombarsing, Jan-Jakob Sonke, Jonas Teuwen |
| 2024 | CVPR | How to Train Neural Field Representations: A Comprehensive Study and Benchmark. | Samuele Papa, Riccardo Valperga, David M. Knigge, Miltiadis Kofinas, Phillip Lippe, Jan-Jakob Sonke, Efstratios Gavves |
| 2024 | ECCV | Click Prompt Learning with Optimal Transport for Interactive Segmentation. | Jie Liu, Haochen Wang, Wenzhe Yin, Jan-Jakob Sonke, Efstratios Gavves |
| 2024 | MICCAI | Deep Multi-contrast Cardiac MRI Reconstruction via vSHARP with Auxiliary Refinement Network. | George Yiasemis, Nikita Moriakov, Jan-Jakob Sonke, Jonas Teuwen |
| 2024 | UAI | Domain Adaptation with Cauchy-Schwarz Divergence. | Wenzhe Yin, Shujian Yu, Yicong Lin, Jie Liu, Jan-Jakob Sonke, Efstratios Gavves |
| 2023 | ICLR | Modelling Long Range Dependencies in $N$D: From Task-Specific to a General Purpose CNN. | David M. Knigge, David W. Romero, Albert Gu, Efstratios Gavves, Erik J. Bekkers, Jakub Mikolaj Tomczak, Mark Hoogendoorn, Jan-Jakob Sonke |
| 2023 | MICCAI | Noise2Aliasing: Unsupervised Deep Learning for View Aliasing and Noise Reduction in 4DCBCT. | Samuele Papa, Efstratios Gavves, Jan-Jakob Sonke |
| 2022 | BMVC | Few-shot Semantic Segmentation with Support-induced Graph Convolutional Network. | Jie Liu, Yanqi Bao, Wenzhe Yin, Haochen Wang, Yang Gao, Jan-Jakob Sonke, Efstratios Gavves |
| 2022 | CVPR | Dynamic Prototype Convolution Network for Few-Shot Semantic Segmentation. | Jie Liu, Yanqi Bao, Guo-Sen Xie, Huan Xiong, Jan-Jakob Sonke, Efstratios Gavves |
| 2022 | CVPR | Recurrent Variational Network: A Deep Learning Inverse Problem Solver applied to the task of Accelerated MRI Reconstruction. | George Yiasemis, Jan-Jakob Sonke, Clarisa I. Snchez, Jonas Teuwen |
| 2015 | GECCO | Diversifying Multi-Objective Gradient Techniques and their Role in Hybrid Multi-Objective Evolutionary Algorithms for Deformable Medical Image Registration. | Kleopatra Pirpinia, Tanja Alderliesten, Jan-Jakob Sonke, Marcel van Herk, Peter A. N. Bosman |
| 2012 | MICCAI | Directional Interpolation for Motion Weighted 4D Cone-Beam CT Reconstruction. | Hua Zhang, Jan-Jakob Sonke |
| 2008 | MICCAI | On-the-Fly Motion-Compensated Cone-Beam CT Using an a Priori Motion Model. | Simon Rit, Jochem Wolthaus, Marcel van Herk, Jan-Jakob Sonke |