| 2026 | AAAI | Learning from Guidelines: Structured Prompt Optimization for Expert Annotation Tasks. | Wenliang Zhong, Haiqing Li, Thao M. Dang, Feng Jiang, Hehuan Ma, Yuzhi Guo, Jean Gao, Junzhou Huang |
| 2025 | MICCAI | HAGE: Hierarchical Alignment Gene-Enhanced Pathology Representation Learning with Spatial Transcriptomics. | Thao M. Dang, Haiqing Li, Yuzhi Guo, Hehuan Ma, Feng Jiang, Yuwei Miao, Qifeng Zhou, Jean Gao, Junzhou Huang |
| 2025 | MICCAI | Text-Guided Multi-instance Learning for Scoliosis Screening via Gait Video Analysis. | Haiqing Li, Yuzhi Guo, Feng Jiang, Thao M. Dang, Hehuan Ma, Qifeng Zhou, Jean Gao, Junzhou Huang |
| 2020 | PSB | Network Representation of Large-Scale Heterogeneous RNA Sequences with Integration of DiverseMulti-omics, Interactions, and Annotations Data. | Nhat Tran, Jean Gao |
| 2019 | ICMLA | Semi-Supervised Discriminative Transfer Learning in Cross-Language Text Classification. | Mingon Kang, Ashis Kumer Biswas, Dong-Chul Kim, Jean Gao |
| 2015 | ICDM | Flood Prediction and Mining Influential Spatial Features on Future Flood with Causal Discovery. | Piraporn Jangyodsuk, Dong-Jun Seo, Ramez Elmasri, Jean Gao |
| 2014 | BIBE | Multi-block and Multi-task Learning for Integrative Genomic Study. | Mingon Kang, Dong-Chul Kim, Chunyu Liu, Baoju Zhang, Xiaoyong Wu, Jean Gao |
| 2014 | BIBE | Integration of DNA Methylation, Copy Number Variation, and Gene Expression for Gene Regulatory Network Inference and Application to Psychiatric Disorders. | Dong-Chul Kim, Mingon Kang, Baoju Zhang, Xiaoyong Wu, Chunyu Liu, Jean Gao |
| 2013 | ICMLA | eQTL Mapping Study via Regularized Sparse Canonical Correlation Analysis. | Mingon Kang, Shuo Li, Dong-Chul Kim, Chunyu Liu, Baoju Zhang, Xiaoyong Wu, Jean Gao |
| 2013 | ICMLA | A Fast Multi-component Latent Variable Regression Framework for Quantitative Analysis of Surface-Enhanced Raman Spectra. | Shuo Li, James O. Nyagilo, Digant P. Dave, Baoju Zhang, Xiaoyong Wu, Jean Gao |
| 2012 | ICMLA | A New Continuum Regression Method for Quantitative Analysis of Raman Spectrum. | Shuo Li, Jean Gao, James O. Nyagilo, Digant P. Dave |
| 2011 | ICMLA | Nonlinear RANSAC Optimization for Parameter Estimation with Applications to Phagocyte Transmigration. | Mingon Kang, Jean Gao, Liping Tang |
| 2010 | BIBE | Learning Proteomic Network Structure by a New Hill Climbing Algorithm. | Dong-Chul Kim, Jean Gao, Chin-Rang Yang |
| 2009 | ICCV | Computation complexity of branch-and-bound model selection. | Ninad Thakoor, Venkat Devarajan, Jean Gao |
| 2008 | BIBE | Signaling biomarker pattern discovery using reverse phase protein microarray. | Young Bun Kim, Jean Gao, Johanne V. Pastor, Kevin P. Rosenblatt |
| 2008 | BIBE | A hybrid computational model for phagocyte transmigration. | Jiaxing Xue, Jean Gao, Liping Tang |
| 2008 | CVPR | Branch-and-bound hypothesis selection for two-view multiple structure and motion segmentation. | Ninad Thakoor, Jean Gao |
| 2008 | ICPR | Multi-stage branch-and-bound for maximum variance disparity clustering. | Ninad Thakoor, Venkat Devarajan, Jean Gao |
| 2007 | BIBE | Biomarker Selection for Predicting Alzheimer Disease Using High-Resolution MALDI-TOF Data. | Jung Hun Oh, Young Bun Kim, Prem Gurnani, Kevin P. Rosenblatt, Jean Gao |
| 2007 | BIBE | Phagocyte Transmigration Modeling Using System Dynamic Controls. | Jiaxing Xue, Jean Gao, Liping Tang |
| 2007 | CVPR | Real-time Planar Surface Segmentation in Disparity Space. | Ninad Thakoor, Sungyong Jung, Jean Gao |
| 2007 | ICIP | A Statistical Approach for Intensity Loss Compensation of Confocal Microscopy Images. | Sowmya Gopinath, Ninad Thakoor, Jean Gao, Kate Luby-Phelps |
| 2006 | BIBE | Unsupervised Gene Selection For High Dimensional Data. | Young Bun Kim, Jean Gao |
| 2006 | BIBE | Prediction of labor for pregnant women using high-resolution mass spectrometry data. | Jung Hun Oh, Animesh Nandi, Prem Gurnani, Peter Bryant-Greenwood, Kevin P. Rosenblatt, Jean Gao |
| 2006 | CIBCB | A New Hybrid Approach for Unsupervised Gene Selection. | Young Bun Kim, Jean Gao |
| 2006 | CIBCB | Classification of Relapse Ovarian Cancer on MALDI-TOF Mass Spectrometry Data. | Jung Hun Oh, Animesh Nandi, Prem Gurnani, Lynne Knowles, John Schorge, Kevin P. Rosenblatt, Jean Gao |
| 2006 | ICIP | Detecting Occlusion for Hidden Markov Modeled Shapes. | Ninad Thakoor, Sungyong Jung, Jean Gao |
| 2006 | ICPR | Occlusion Resistant Shape Classifier based onWarped Optimal Path Matching. | Ninad Thakoor, Sungyong Jung, Quan Wen, Jean Gao |
| 2006 | ICPR | Markov Chain Monte Carlo Data Association for Merge and Split Detection in Tracking Protein Clusters. | Quan Wen, Jean Gao, Kate Luby-Phelps |
| 2005 | ACIVS | Hidden Markov Model Based 2D Shape Classification. | Ninad Thakoor, Jean Gao |
| 2005 | BIBE | Peptide Identification by Tandem Mass Spectra: An Efficient Parallel Searching. | Jung Hun Oh, Jean Gao |
| 2005 | CIBCB | A New Semi-Supervised Subspace Clustering Algorithm on Fitting Mixture Models. | Young Bun Kim, Jean Gao |
| 2005 | CIBCB | Multicategory Classification using Extended SVM-RFE and Markov Blanket on SELDITOF Mass Spectrometry Data. | Jung Hun Oh, Jean Gao, Animesh Nandi, Prem Gurnani, Lynne Knowles, John Schorge, Kevin P. Rosenblatt |
| 2005 | ICCV | Shape Classifer Based on Generalized Probabilistic Descent Method with Hidden Markov Descriptor. | Ninad Thakoor, Jean Gao |
| 2005 | ICIP | Automatic video object shape extraction and its classification with camera in motion. | Ninad Thakoor, Jean Gao |
| 2005 | ICIP | A particle filter framework using optimal importance function for protein molecules tracking. | Quan Wen, Jean Gao, Akio Kosaka, Hidekazu Iwaki, Kate Luby-Phelps, Dorothy Mundy |
| 2005 | SMC | Automatic Extraction and Localization of Multiple Moving Objects with Stereo Camera in Motion. | Ninad Thakoor, Jean Gao |
| 2004 | ICIP | A motion field reconstruction scheme for smooth boundary video object segmentation. | Jean Gao, Ninad Thakoor, Sungyong Jung |
| 2004 | SMC | On the development of a fully automated cryosection image registration system. | Hua-mei Chen, Yi-Fung Chen, Jean Gao |
| 2003 | AVSS | Self-Occlusion Immune Video Tracking of Objects in Cluttered Environments. | Jean Gao |
| 2003 | ICIP | Object shape delineation during tracking process. | Jean Gao |
| 2002 | ICIP | A multi-frame based motion estimation for semantic object tracking in the presence of occlusion. | Jean Gao, Avinash C. Kak |
| 2002 | IPAS | Circularly establishing feature correspondences and motion estimation for object tracking via multivisit of Kalman filtering. | Jean Gao, Akio Kosaka |
| 1999 | ICIP | Interactive Color Image Segmentation Editor Driven by Active Contour Model. | Jean Gao, Akio Kosaka, Avinash C. Kak |
| 1998 | ICIP | A Deformable Model for Human Organ Extraction. | Jean Gao, Akio Kosaka, Avinash C. Kak |