| 2025 | PacificVis | Cytosplore EvoViewer: Visual Analytics of Conserved Evolutionary Patterns in multi-species single-cell sequencing data. | Soumyadeep Basu, Morgan Wirthlin, Jeroen Eggermont, Thomas Kroes, Boudewijn P. F. Lelieveldt, Ed S. Lein, Trygve E. Bakken, Thomas Hllt |
| 2011 | GECCO | On the log-normal self-adaptation of the mutation rate in binary search spaces. | Johannes W. Kruisselbrink, Rui Li, Edgar Reehuis, Jeroen Eggermont, Thomas Bck |
| 2008 | CEC | Metamodel-assisted mixed integer evolution strategies and their application to intravascular ultrasound image analysis. | Rui Li, Michael T. M. Emmerich, Jeroen Eggermont, Ernst G. P. Bovenkamp, Thomas Bck, Jouke Dijkstra, Johan H. C. Reiber |
| 2008 | PPSN | Mixed-Integer Evolution Strategies with Dynamic Niching. | Rui Li, Jeroen Eggermont, Ofer M. Shir, Michael T. M. Emmerich, Thomas Bck, Jouke Dijkstra, Johan H. C. Reiber |
| 2007 | IWINAC | Strategies for Affect-Controlled Action-Selection in Soar-RL. | Eric Hogewoning, Joost Broekens, Jeroen Eggermont, Ernst G. P. Bovenkamp |
| 2006 | GECCO | Mixed-integer optimization of coronary vessel image analysis using evolution strategies. | Rui Li, Michael Emmerich, Jeroen Eggermont, Ernst G. P. Bovenkamp |
| 2006 | PPSN | Mixed-Integer NK Landscapes. | Rui Li, Michael T. M. Emmerich, Jeroen Eggermont, Ernst G. P. Bovenkamp, Thomas Bck, Jouke Dijkstra, Johan H. C. Reiber |
| 2004 | PPSN | Detecting and Pruning Introns for Faster Decision Tree Evolution. | Jeroen Eggermont, Joost N. Kok, Walter A. Kosters |
| 2004 | SAC | Genetic Programming for data classification: partitioning the search space. | Jeroen Eggermont, Joost N. Kok, Walter A. Kosters |
| 2002 | EUROGP | Evolving Fuzzy Decision Trees with Genetic Programming and Clustering. | Jeroen Eggermont |
| 2001 | EUROGP | Adaptive Genetic Programming Applied to New and Existing Simple Regression Problems. | Jeroen Eggermont, Jano I. van Hemert |
| 2001 | EUROGP | Raising the Dead: Extending Evolutionary Algorithms with a Case-Based Memory. | Jeroen Eggermont, Tom Lenaerts, Sanna Pyhnen, Alexandre Termier |
| 1999 | EUROGP | Adapting the Fitness Function in GP for Data Mining. | Jeroen Eggermont, A. E. Eiben, Jano I. van Hemert |
| 1999 | IDA | A Comparison of Genetic Programming Variants for Data Classification. | Jeroen Eggermont, A. E. Eiben, Jano I. van Hemert |