| 2017 | CCGRID | Apply Block Index Technique to Scientific Data Analysis and I/O Systems. | Tzu-Hsien Wu, Jerry Chi-Yuan Chou, Norbert Podhorszki, Junmin Gu, Yuan Tian, Scott Klasky, Kesheng Wu |
| 2017 | SC | Optimizing the query performance of block index through data analysis and I/O modeling. | Tzu-Hsien Wu, Jerry Chi-Yuan Chou, Shyng Hao, Bin Dong, Scott Klasky, Kesheng Wu |
| 2016 | CCGRID | Indexing Blocks to Reduce Space and Time Requirements for Searching Large Data Files. | Tzu-Hsien Wu, Hao Shyng, Jerry Chi-Yuan Chou, Bin Dong, Kesheng Wu |
| 2015 | ICPADS | In-memory Query System for Scientific Dataseis. | Hsuan-Te Chiu, Jerry Chi-Yuan Chou, Venkat Vishwanath, Kesheng Wu |
| 2014 | ICPADS | Simplifying index file structure to improve I/O performance of parallel indexing. | Hsuan-Te Chiu, Jerry Chi-Yuan Chou, Venkat Vishwanath, Surendra Byna, Kesheng Wu |
| 2013 | SSDBM | Optimizing fastquery performance on lustre file system. | Kuan-Wu Lin, Surendra Byna, Jerry Chi-Yuan Chou, Kesheng Wu |
| 2012 | SC | Parallel I/O, analysis, and visualization of a trillion particle simulation. | Surendra Byna, Jerry Chi-Yuan Chou, Oliver Rbel, Prabhat, Homa Karimabadi, William S. Daughton, Vadim Roytershteyn, E. Wes Bethel, Mark Howison, Ke-Jou Hsu, Kuan-Wu Lin, Arie Shoshani, Andrew Uselton, Kesheng Wu |
| 2011 | CLUSTER | FastQuery: A Parallel Indexing System for Scientific Data. | Jerry Chi-Yuan Chou, Kesheng Wu, Prabhat |
| 2011 | ICDCS | Energy-Aware Scheduling in Disk Storage Systems. | Jerry Chi-Yuan Chou, Jinoh Kim, Doron Rotem |
| 2011 | SC | Parallel index and query for large scale data analysis. | Jerry Chi-Yuan Chou, Mark Howison, Brian Austin, Kesheng Wu, Ji Qiang, E. Wes Bethel, Arie Shoshani, Oliver Rbel, Prabhat, Robert D. Ryne |
| 2011 | SSDBM | FastQuery: A General Indexing and Querying System for Scientific Data. | Jerry Chi-Yuan Chou, Kesheng Wu, Prabhat |
| 2011 | SSDBM | Energy Proportionality and Performance in Data Parallel Computing Clusters. | Jinoh Kim, Jerry Chi-Yuan Chou, Doron Rotem |
| 2009 | IWQoS | Optimal multi-path routing and bandwidth allocation under utility max-min fairness. | Jerry Chi-Yuan Chou, Bill Lin |
| 2004 | CCGRID | SCALLOP: a scalable and load-balanced peer-to-peer lookup protocol for high-performance distributed systems. | Jerry Chi-Yuan Chou, Tai-Yi Huang, Kuang-Li Huang |
| 2003 | PDPTA | A Scalable and Load-Balanced Lookup Protocol for High-Performance Peer-to-Peer Distributed Systems. | Jerry Chi-Yuan Chou, Tai-Yi Huang |