| 2025 | AAAI | SWAMamba: A Sliding Window Attention Mamba Framework for Predicting Translation Elongation Rates. | Xi Zeng, Fei Ni, Shaoqing Jiao, Dazhi Lu, Jianye Hao, Jiajie Peng |
| 2024 | AAAI | Designing Biological Sequences without Prior Knowledge Using Evolutionary Reinforcement Learning. | Xi Zeng, Xiaotian Hao, Hongyao Tang, Zhentao Tang, Shaoqing Jiao, Dazhi Lu, Jiajie Peng |
| 2023 | IJCNN | HQProtoPNet: An Evidence-Based Model for Interpretable Image Recognition. | Jingqi Wang, Jiajie Peng, Zhiming Liu, Hengjun Zhao |
| 2022 | AAAI | Deep Representation Debiasing via Mutual Information Minimization and Maximization (Student Abstract). | Ruijiang Han, Wei Wang, Yuxi Long, Jiajie Peng |
| 2022 | COLING | A Two Stage Adaptation Framework for Frame Detection via Prompt Learning. | Xinyi Mou, Zhongyu Wei, Changjian Jiang, Jiajie Peng |
| 2020 | EMNLP | Automatic Term Name Generation for Gene Ontology: Task and Dataset. | Yanjian Zhang, Qin Chen, Yiteng Zhang, Zhongyu Wei, Yixu Gao, Jiajie Peng, Zengfeng Huang, Weijian Sun, Xuanjing Huang |
| 2020 | IJCAI | Efficient Deep Reinforcement Learning via Adaptive Policy Transfer. | Tianpei Yang, Jianye Hao, Zhaopeng Meng, Zongzhang Zhang, Yujing Hu, Yingfeng Chen, Changjie Fan, Weixun Wang, Wulong Liu, Zhaodong Wang, Jiajie Peng |
| 2019 | AAAI | Towards Gene Function Prediction via Multi-Networks Representation Learning. | Hansheng Xue, Jiajie Peng, Xuequn Shang |
| 2019 | CIKM | Integrating Multi-Network Topology via Deep Semi-supervised Node Embedding. | Hansheng Xue, Jiajie Peng, Jiying Li, Xuequn Shang |