| 2025 | AAAI | CoPRA: Bridging Cross-domain Pretrained Sequence Models with Complex Structures for Protein-RNA Binding Affinity Prediction. | Rong Han, Xiaohong Liu, Tong Pan, Jing Xu, Xiaoyu Wang, Wuyang Lan, Zhenyu Li, Zixuan Wang, Jiangning Song, Guangyu Wang, Ting Chen |
| 2025 | AAAI | Rethinking Cancer Gene Identification Through Graph Anomaly Analysis. | Yilong Zang, Lingfei Ren, Yue Li, Zhikang Wang, David Antony Selby, Zheng Wang, Sebastian Josef Vollmer, Hongzhi Yin, Jiangning Song, Junhang Wu |
| 2022 | CVPR | Feature Erasing and Diffusion Network for Occluded Person Re-Identification. | Zhikang Wang, Feng Zhu, Shixiang Tang, Rui Zhao, Lihuo He, Jiangning Song |
| 2020 | AMIA | Prediction of secondary structure population and intrinsic disorder of proteins using multitask deep learning. | Ying Xu, Andr Leier, Tatiana T. Marquez-Lago, Jue Xie, Antonio Jimeno-Yepes, James C. Whisstock, Campbell Wilson, Jiangning Song |
| 2020 | PAKDD | PhosTransfer: A Deep Transfer Learning Framework for Kinase-Specific Phosphorylation Site Prediction in Hierarchy. | Ying Xu, Campbell Wilson, Andr Leier, Tatiana T. Marquez-Lago, James C. Whisstock, Jiangning Song |
| 2017 | BigData | Towards Elucidating the Structural Principles of Host-Pathogen Protein-Protein Interaction Networks: A Bioinformatics Survey. | Huaming Chen, Jiangning Song, Geng Sun, Jun Shen, Lei Wang |
| 2017 | BigData | Leveraging Stacked Denoising Autoencoder in Prediction of Pathogen-Host Protein-Protein Interactions. | Huaming Chen, Jun Shen, Lei Wang, Jiangning Song |
| 2017 | CSCWD | Collaborative data analytics towards prediction on pathogen-host protein-protein interactions. | Huaming Chen, Jun Shen, Lei Wang, Jiangning Song |
| 2016 | BIBE | Host-Pathogen Protein Interaction Prediction Based on Local Topology Structures of a Protein Interaction Network. | Jira Jindalertudomdee, Morihiro Hayashida, Jiangning Song, Tatsuya Akutsu |
| 2016 | BigData | Towards Data Analytics of Pathogen-Host Protein-Protein Interaction: A Survey. | Huaming Chen, Jun Shen, Lei Wang, Jiangning Song |