| 2024 | ICCCI | Extracting Common DNA Segments from the Complete Genomes of 7538 Viruses and Five Selected Mammals. | Jing-Doo Wang, Yi-Chun Wang |
| 2018 | BIBE | Constructing the Relationship Tree of All Viruses via Whole Genomic Sequences. | Jing-Doo Wang, Yi-Chun Wang |
| 2017 | BIBE | Extracting the Co-occurrences of DNA Maximal Repeats in both Human and Viruses. | Jing-Doo Wang, Yi-Chun Wang, Rouh-Mei Hu, Jeffrey J. P. Tsai |
| 2016 | BIBE | Genome-Wide Functional Identification of Maximal Consensus Patterns Derived from Multiple Species piRNAs. | Wen-Ling Chan, Mei-Chun Yeh, Jing-Doo Wang, Jan-Gowth Chang, Jeffrey J. P. Tsai |
| 2016 | CIBCB | Mining distinctive DNA patterns from the upstream of human coding&non-coding genes via class frequency distribution. | Jing-Doo Wang, Wen-Ling Chan, Charles C. N. Wang, Jan-Gowth Chang, Jeffrey J. P. Tsai |
| 2015 | CIBCB | A study of comparing the ambiguity of existing virus taxonomy structures using protein's region names in the vector space model. | Jing-Doo Wang |
| 2011 | BIBE | A Comparison Study of Virus Classification by Genome Sequences. | Jing-Doo Wang |
| 2010 | ICMLC | Choquet integral algorithm for thermostable proteins based on Hurst exponent and generalized L-measure. | Horng-Jinh Chang, Pei-Chun Chang, Hsiang-Chuan Liu, Kuei-Jen Lee, Jing-Doo Wang, Yu-Lung Liu |
| 2009 | BIBE | Nonlinear Dynamic Indications in Time Series of Epilepsy Electroencephalogram. | Ta-Cheng Chen, Jiunn-I Shieh, Kuei-Jen Lee, Jing-Doo Wang, Pei-Chun Chang, Hsiang-Chuan Liu |
| 2008 | ICNC | Physiochemical Constraints in Influenza A Hemagglutinin. | Pei-Chun Chang, Jiunn-I Shieh, Jing-Doo Wang, Kuei-Jen Lee, Chung-Hung Li, Hsiang-Chuan Liu |
| 1999 | PACLIC | Implementation and Evaluation of Scalable Approaches for Automatic Chinese Text Categorization. | Jyh-Jong Tsay, Jing-Doo Wang, Chun-Fu Pai, Ming-Kuen Tsay |