| 2023 | ESANN | On Transformer Autoregressive Decoding for Multivariate Time Series Forecasting. | Mohammed Aldosari, John A. Miller |
| 2023 | WSC | Microscopic Vehicular Traffic Simulation: Toward Online Calibration. | Yulong Wang, John A. Miller, Casey Bowman |
| 2022 | WSC | Microscopic Vehicular Traffic Simulation: Comparison of Calibration Techniques. | Casey Bowman, John A. Miller, Yulong Wang |
| 2021 | HPCC | Enhance COVID-19 Mortality Prediction with Human Mobility Trend and Medical Information. | Yogesh Chaudhari, Indrajeet Javeri, Ismailcem Budak Arpinar, John A. Miller, Xiaochuan Li, Bingnan Li, Yuan Ke, Mohammadhossein Toutiaee, Nicole Lazar |
| 2019 | DSAA | Breast Cancer Classification using Deep Transfer Learning on Structured Healthcare Data. | Akram Farhadi, David Chen, Rozalina G. McCoy, Christopher Scott, John A. Miller, Celine M. Vachon, Che Ngufor |
| 2017 | BigData | Adding Support for Theory in Open Science Big Data. | John A. Miller, Hao Peng, Michael E. Cotterell |
| 2017 | BigData | Bayesian Networks with Structural Restrictions: Parallelization, Performance, and Efficient Cross-Validation. | Hao Peng, Zhe Jin, John A. Miller |
| 2017 | WSC | Advanced tutorial on microscopic discrete-event traffic simulation. | John A. Miller, Hao Peng, Casey N. Bowman |
| 2017 | SERVICES | Adding Support for Theory in Open Science Big Data. | John A. Miller, Hao Peng, Michael E. Cotterell |
| 2016 | BigData | Open Source Big Data Analytics Frameworks Written in Scala. | John A. Miller, Casey Bowman, Vishnu Gowda Harish, Shannon Quinn |
| 2016 | WSC | Modeling traffic flow using simulation and Big Data analytics. | Casey N. Bowman, John A. Miller |
| 2015 | BigData | Research Directions for Big Data Graph Analytics. | John A. Miller, Lakshmish Ramaswamy, Krys J. Kochut, Arash Fard |
| 2015 | BigData | Using Semantics in Predictive Big Data Analytics. | Mustafa V. Nural, Michael E. Cotterell, John A. Miller |
| 2014 | BigData | DualIso: An Algorithm for Subgraph Pattern Matching on Very Large Labeled Graphs. | Matthew Saltz, Ayushi Jain, Abhishek Kothari, Arash Fard, John A. Miller, Lakshmish Ramaswamy |
| 2013 | BigData | Techniques for Graph Analytics on Big Data. | M. Usman Nisar, Arash Fard, John A. Miller |
| 2013 | WSC | Supporting a modeling continuum in scalation: From predictive analytics to simulation modeling. | John A. Miller, Michael E. Cotterell, Stephen J. Buckley |
| 2012 | FOIS | Suggestions for Galaxy Workflow Design Using Semantically Annotated Services. | Alok Dhamanaskar, Michael E. Cotterell, Jie Zheng, Jessica C. Kissinger, Christian J. Stoeckert Jr., John A. Miller |
| 2011 | WSC | Sopt: ontology for simulation optimization for scientific experiments. | Jun Han, John A. Miller, Gregory A. Silver |
| 2011 | SERVICES | Web Service Composition Using Service Suggestions. | Rui Wang, Chaitanya Guttula, Maryam Panahiazar, Haseeb Yousaf, John A. Miller, Eileen T. Kraemer, Jessica C. Kissinger |
| 2010 | ICWS | Enhancing Scalability and Performance of Mashups Through Merging and Operator Reordering. | Osama Al-Haj Hassan, Lakshmish Ramaswamy, John A. Miller |
| 2010 | WSC | Using Domain Specific Language for modeling and simulation: ScalaTion as a case study. | John A. Miller, Jun Han, Maria Hybinette |
| 2010 | SERVICES | Ranking-Based Suggestion Algorithms for Semantic Web Service Composition. | Rui Wang, Sumedha Ganjoo, John A. Miller, Eileen T. Kraemer |
| 2009 | ICWS | MACE: A Dynamic Caching Framework for Mashups. | Osama Al-Haj Hassan, Lakshmish Ramaswamy, John A. Miller |
| 2009 | WSC | Supporting Interoperability using the Discrete-event Modeling Ontology (DeMO). | Gregory A. Silver, Kushel Rai Bellipady, John A. Miller, William S. York, Krys J. Kochut |
| 2009 | SERVICES | Adapting the Galaxy Bioinformatics Tool to Support Semantic Web Service Composition. | Rui Wang, Douglas Brewer, Shefali Shastri, Srikalyan Swayampakula, John A. Miller, Eileen T. Kraemer, Jessica C. Kissinger |
| 2008 | WSC | Panel discussion: What makes good research in modeling and simulation: Sustaining the growth and vitality of the M&S discipline. | Levent Yilmaz, Paul Davis, Paul A. Fishwick, Xiaolin Hu, John A. Miller, Maria Hybinette, Tuncer I. ren, Paul Reynolds, Hessam S. Sarjoughian, Andreas Tolk |
| 2008 | SERVICES | WS-BioZard: A Wizard for Composing Bioinformatics Web Services. | Zhiming Wang, John A. Miller, Jessica C. Kissinger, Rui Wang, Douglas Brewer, Cristina Aurrecoechea |
| 2007 | IKE | Spatial and Temporal Target Association through Semantic Analysis and GPS Data Mining. | David Luper, Delroy Cameron, John A. Miller, Hamid R. Arabnia |
| 2007 | WSC | From domain ontologies to modeling ontologies to executable simulation models. | Gregory A. Silver, Osama Al-Haj Hassan, John A. Miller |
| 2006 | GRC | Expressing authorization in semantic web services. | Richard Scott Patterson, John A. Miller |
| 2006 | ICWS | Semantic Interoperability of Web Services - Challenges and Experiences. | Meenakshi Nagarajan, Kunal Verma, Amit P. Sheth, John A. Miller, Jon Lathem |
| 2006 | ICWS | Optimal Adaptation in Web Processes with Coordination Constraints. | Kunal Verma, Prashant Doshi, Karthik Gomadam, John A. Miller, Amit P. Sheth |
| 2006 | WSC | Ontology based representations of simulation models following the process interaction world view. | Gregory A. Silver, Lee W. Lacy, John A. Miller |
| 2005 | ICSOC | Demonstrating Dynamic Configuration and Execution of Web Processes. | Karthik Gomadam, Kunal Verma, Amit P. Sheth, John A. Miller |
| 2005 | ICSOC | OpenWS-Transaction: Enabling Reliable Web Service Transactions. | Ivan Vasquez, John A. Miller, Kunal Verma, Amit P. Sheth |
| 2005 | ICWS | A Semantic Template Based Designer for Web Processes. | Ranjit Mulye, John A. Miller, Kunal Verma, Karthik Gomadam, Amit P. Sheth |
| 2005 | ICWS | Linking Semantics Web Service Efforts. | Kunal Verma, Adrian Mocan, Michal Zaremba, Amit P. Sheth, John A. Miller, Christoph Bussler |
| 2005 | WSC | Simulation and the semantic web. | John A. Miller, Gregory T. Baramidze |
| 2004 | WSC | Ontologies for Modeling and Simulation: Issues and Approaches. | Paul A. Fishwick, John A. Miller |
| 2003 | ICWS | Adding Semantics to Web Services Standards. | Kaarthik Sivashanmugam, Kunal Verma, Amit P. Sheth, John A. Miller |
| 2002 | WSC | XML-based modeling and simulation: web service technologies and their synergy with simulation. | Senthilanand Chandrasekaran, Gregory A. Silver, John A. Miller, Jorge Cardoso, Amit P. Sheth |
| 2000 | WSC | Finding a substrate for federated components on the web. | John A. Miller, Andrew F. Seila, Junxiu Tao |
| 1999 | CaiSE | A Multilevel Secure Workflow Management System. | Myong H. Kang, Judith N. Froscher, Amit P. Sheth, Krys J. Kochut, John A. Miller |
| 1999 | WSC | Scenario management in Web-based simulation. | Andrew F. Seila, John A. Miller |
| 1998 | WSC | Component-based Simulation Environments: JSIM as a Case Study Using Java Beans. | John A. Miller, Youngfu Ge, Junxin Tao |
| 1997 | ER | Perspectives in Modeling: Simulation, Database, and Workflow. | John A. Miller, Amit P. Sheth, Krys J. Kochut |
| 1996 | WSC | Java-Based Query Driven Simulation Environment. | Rajesh S. Nair, John A. Miller, Zhiwei Zhang |
| 1996 | VLDB | Supporting State-Wide Immunisation Tracking Using Multi-Paradigm Workflow Technology. | Amit P. Sheth, Krys J. Kochut, John A. Miller, Devashish Worah, Souvik Das, Chenye Lin, Devanand Palaniswami, John Lynch, Ivan Shevchenko |
| 1995 | WSC | Simulation Modeling within Workflow Technology. | John A. Miller, Amit P. Sheth, Krys J. Kochut, Xuzhong Wang, Arun Murugan |
| 1993 | ISMB | Design of an Object-Oriented Database for Reverse Genetics. | Krys J. Kochut, Jonathan P. Arnold, John A. Miller, Walter D. Potter |
| 1992 | WSC | Simulation of Database Transaction Management Protocols: Hybrids and Variants of Time Warp. | John A. Miller |
| 1984 | SRDS | Performance Modeling of Database Recovery Protocols. | Nancy D. Griffeth, John A. Miller |
| 1982 | ICDCS | Distributed Compilation: A Case Study. | John A. Miller, Richard J. LeBlanc |