| 2021 | AMIA | Colorectal Polyp Extraction System (CoPEx): A Natural Language Processing Pipeline to Extract Colorectal Polyp Characteristics from Pathology Reports. | Ryzen Benson, Candace Winterton, Maci Winn, Mei Liu, Noor Abu-El-Rub, John F. Hurdle, Mike Conway, Andrew Gawron, Sheetal Hardikar |
| 2016 | AMIA | RuSH: a Rule-based Segmentation Tool Using Hashing for Extremely Accurate Sentence Segmentation of Clinical Text. | Jianlin Shi, Danielle L. Mowery, Kristina M. Doing-Harris, John F. Hurdle |
| 2015 | AMIA | POETenceph - Automatic identification of clinical notes indicating encephalopathy using a realist ontology. | Kristina Doing-Harris, Charlene R. Weir, Sean Igo, Jianlin Shi, YiJun Shao, John F. Hurdle |
| 2015 | AMIA | A Study of Concept Extraction Across Different Types of Clinical Notes. | Youngjun Kim, Ellen Riloff, John F. Hurdle |
| 2015 | AMIA | Nutrition Informatics Applications in Clinical Practice: a Systematic Review. | Jennifer C. North, Kristine C. Jordan, Julie Metos, John F. Hurdle |
| 2013 | AMIA | qDIET: Toward an Automated, Self-sustaining Knowledge Base to Facilitate Linking Point-of-sale Grocery Items to Nutritional Content. | Valliammai Chidambaram, Philip J. Brewster, Kristine C. Jordan, John F. Hurdle |
| 2013 | AMIA | Training the Informatics Research Workforce, Part 1. | Valerie Florance, John F. Hurdle, Rita Kukafka, William R. Hersh, Cynthia S. Gadd, Alexa T. McCray |
| 2013 | CIKM | Document sublanguage clustering to detect medical specialty in cross-institutional clinical texts. | Kristina Doing-Harris, Olga V. Patterson, Sean Igo, John F. Hurdle |
| 2007 | AMIA | Leveraging Semantic Knowledge in IRB Databases to Improve Translation Science. | John F. Hurdle, Jeffery R. Botkin, Thomas C. Rindflesch |
| 2006 | AMIA | Use of verbal protocol analysis for identification of ADE signals. | Shobha Phansalkar, Vimla L. Patel, Jennifer M. Hoffman, John F. Hurdle |
| 2003 | AMIA | Critical Gaps in the World's Largest Electronic Medical Record: Ad Hoc Nursing Narratives and Invisible Adverse Drug Events. | John F. Hurdle, Charlene R. Weir, Beverly Roth, Jennifer M. Hoffman, Jonathan R. Nebeker |
| 2001 | AMIA | Developing a taxonomy for research in adverse drug events: potholes and signposts. | Jonathan R. Nebeker, John F. Hurdle, Jennifer M. Hoffman, Beverly Roth, Charlene R. Weir, Matthew H. Samore |
| 1997 | AMIA | Department of Veterans Affairs, University of Utah consortium participation in the NLM/AHCPR Large Scale Vocabulary Test. | J. Chris Eagon, Eduardo Ortiz, Kenneth A. Zollo, John F. Hurdle, Michael J. Lincoln |