| 2021 | Networking | Pulsarcast: Scalable, Reliable Pub-Sub over P2P Nets. | Joo Antunes, David Dias, Lus Veiga |
| 2019 | IBPRIA | Weighted Multisource Tradaboost. | Joo Antunes, Alexandre Bernardino, Asim Smailagic, Daniel P. Siewiorek |
| 2018 | BMVC | AHA-3D: A Labelled Dataset for Senior Fitness Exercise Recognition and Segmentation from 3D Skeletal Data. | Joo Antunes, Alexandre Bernardino, Asim Smailagic, Daniel P. Siewiorek |
| 2012 | ISSRE | Recycling Test Cases to Detect Security Vulnerabilities. | Joo Antunes, Nuno Ferreira Neves |
| 2011 | IJCCI | Fuzzy Logic based Quality of Service Models. | Joo Antunes, Andr Vasconcelos, Jos M. Tribolet |
| 2011 | ISSRE | Using Behavioral Profiles to Detect Software Flaws in Network Servers. | Joo Antunes, Nuno Ferreira Neves |
| 2011 | SRDS | DiveInto: Supporting Diversity in Intrusion-Tolerant Systems. | Joo Antunes, Nuno Ferreira Neves |
| 2008 | ISSRE | Detection and Prediction of Resource-Exhaustion Vulnerabilities. | Joo Antunes, Nuno Ferreira Neves, Paulo Verssimo |
| 2006 | DSN | Using Attack Injection to Discover New Vulnerabilities. | Nuno Ferreira Neves, Joo Antunes, Miguel Correia, Paulo Verssimo, Rui Ferreira Neves |