| 2021 | ICPRAM | Web based Object Annotation Tool using a Triplet-ReID Sorting Approach. | Afonso Costa, Andr L. Ferreira, Joo M. Fernandes |
| 2019 | SPLC | An industrial case study for adopting software product lines in automotive industry: an evolution-based approach for software product lines (EVOA-SPL). | Karam Ignaim, Joo M. Fernandes |
| 2018 | IECON | Bibliometric Analysis of 50 Years of IEEE Industrial Electronics Society Publications. | Joo M. Fernandes, Joo-Paulo Barros, Lus Gomes |
| 2018 | QUATIC | A Systematic Reuse-Based Approach for Customized Cloned Variants. | Karam Ignaim, Joo M. Fernandes, Andr L. Ferreira, Jana Seidel |
| 2017 | EASE | Industry-academia collaborations in software engineering: An empirical analysis of challenges, patterns and anti-patterns in research projects. | Vahid Garousi, Michael Felderer, Joo M. Fernandes, Dietmar Pfahl, Mika V. Mntyl |
| 2016 | ICCSA | Using Scrum Together with UML Models: A Collaborative University-Industry R&D Software Project. | Nuno Santos, Joo M. Fernandes, Maria Sameiro Carvalho, Pedro V. Silva, Fbio A. Fernandes, Mrcio P. Rebelo, Diogo Barbosa, Paulo Maia, Marco Couto, Ricardo J. Machado |
| 2016 | QUATIC | Foreword of the Thematic Track Quality Aspects in Agile Methods. | Eduardo Miranda, Joo M. Fernandes |
| 2015 | SNPD | Comparing AHP and ELECTRE I for prioritizing software requirements. | Joo M. Fernandes, Susana Prozil Rodrigues, Lino A. Costa |
| 2013 | SIMULTECH | Assisting Data Warehousing Populating Processes Design through Modelling using Coloured Petri Nets. | Diogo Silva, Joo M. Fernandes, Orlando Belo |
| 2010 | QUATIC | Classification and Comparison of Agile Methods. | Joo M. Fernandes, Mauro Almeida |
| 2009 | ICSE | Model-based Methodologies for Pervasive and Embedded Software. | Joo M. Fernandes, Ricardo Jorge Machado, Lus C. Lamb, Flvio Rech Wagner |
| 2009 | ICSEA | Validation of Scenario-Based Business Requirements with Coloured Petri Nets. | scar R. Ribeiro, Joo M. Fernandes |
| 2007 | APSEC | Requirements Engineering for Reactive Systems: Coloured Petri Nets for an Elevator Controller. | Joo M. Fernandes, Jens Bk Jrgensen, Simon Tjell |
| 2007 | ICSEA | Deriving Software Architectures for CRUD Applications: The FPL Tower Interface Case Study. | Atif Mashkoor, Joo M. Fernandes |
| 2007 | QUATIC | Automated Information Systems Generation for Process-Oriented Organizations. | Francisco J. Duarte, Ricardo Jorge Machado, Joo M. Fernandes |
| 2007 | QUATIC | Validation of Reactive Software from Scenario-Based Models. | scar R. Ribeiro, Joo M. Fernandes |
| 2006 | ICSEA | A Two-Year Software Engineering M.Sc. Degree Designed Under the Bologna Declaration Principles. | Joo M. Fernandes, Ricardo Jorge Machado |
| 2006 | PROFES | Refinement of Software Architectures by Recursive Model Transformations. | Ricardo Jorge Machado, Joo M. Fernandes, Paula Monteiro, Helena Rodrigues |
| 2004 | PROFES | Using RUP for Process-Oriented Organisations. | Joo M. Fernandes, Francisco J. Duarte |
| 2002 | PROFES | Heterogeneous Information Systems Integration: Organizations and Methodologies. | Ricardo Jorge Machado, Joo M. Fernandes |