| 2019 | SiggraphA | Sense of non-presence: Visualization of invisible presence. | Takuya Mikami, Min Xu, Kaori Yoshida, Kousuke Matsunaga, Jun Fujiki |
| 2015 | MVA | Geometric interpretation of Fisher's linear discriminant analysis through communication theory. | Jun Fujiki, Masaru Tanaka, Hitoshi Sakano, Akisato Kimura |
| 2014 | ICPRAM | Tracking by Shape with Deforming Prediction for Non-rigid Objects. | Kenji Nishida, Takumi Kobayashi, Jun Fujiki |
| 2013 | CAIP | Flexible Hypersurface Fitting with RBF Kernels. | Jun Fujiki, Shotaro Akaho |
| 2013 | CAIP | Pairwise Similarity for Line Extraction from Distorted Images. | Hideitsu Hino, Jun Fujiki, Shotaro Akaho, Yoshihiko Mochizuki, Noboru Murata |
| 2013 | MVA | Finding discriminant axes from multiple viewpoints. | Jun Fujiki |
| 2012 | ICONIP | Robust Hypersurface Fitting Based on Random Sampling Approximations. | Jun Fujiki, Shotaro Akaho, Hideitsu Hino, Noboru Murata |
| 2011 | CAIP | Hypersurface Fitting via Jacobian Nonlinear PCA on Riemannian Space. | Jun Fujiki, Shotaro Akaho |
| 2011 | CAIP | Robust Hyperplane Fitting Based on k-th Power Deviation and α-Quantile. | Jun Fujiki, Shotaro Akaho, Hideitsu Hino, Noboru Murata |
| 2011 | CAIP | Multiple Random Subset-Kernel Learning. | Kenji Nishida, Jun Fujiki, Takio Kurita |
| 2011 | ICASSP | Global convergence of independent component analysis based on semidefinite programming relaxation. | Shotaro Akaho, Jun Fujiki |
| 2011 | IJCCI | Ensemble Random-subset SVM. | Kenji Nishida, Jun Fujiki, Takio Kurita |
| 2010 | ICPR | Self-Calibration of Radially Symmetric Distortion by Model Selection. | Jun Fujiki, Hideitsu Hino, Yumi Usami, Shotaro Akaho, Noboru Murata |
| 2009 | CAIP | Calibration of Radially Symmetric Distortion by Fitting Principal Component. | Hideitsu Hino, Yumi Usami, Jun Fujiki, Shotaro Akaho, Noboru Murata |
| 2008 | SIGGRAPH | Constellation: a cognitive morphing point-based animation. | Jun Fujiki, Taketoshi Ushiama, Reiji Tsuruno, Kiyoshi Tomimatsu |
| 2008 | SIGGRAPH | Tile-based field modeling. | Maki Terai, Jun Fujiki, Reiji Tsuruno, Kiyoshi Tomimatsu |
| 2008 | SiggraphA | theRelativity. | Jun Fujiki, Shigeru Owada |
| 2007 | SIGGRAPH | OLE coordinate system. | Jun Fujiki |
| 2007 | SIGGRAPH | Tile-based ambiguous modeling. | Maki Terai, Jun Fujiki, Reiji Tsuruno, Kiyoshi Tomimatsu |
| 2006 | CHI | Incompatible BLOCK: wonders accompanied interface. | Jun Fujiki, Taketoshi Ushiama, Kiyoshi Tomimatsu |
| 2006 | SIGGRAPH | Incompatible BLOCK: wonders accompanied interface. | Jun Fujiki, Taketoshi Ushiama, Kiyoshi Tomimatsu |
| 2006 | SIGGRAPH | A view-oriented interface for block-based modeling. | Jun Fujiki, Taketoshi Ushiama, Kiyoshi Tomimatsu |
| 2005 | SIGGRAPH | Hyper-paint: a possible software-toy. | Jun Fujiki, Kiyoshi Tomimatsu |
| 2003 | DIS | Clustering Orders. | Toshihiro Kamishima, Jun Fujiki |
| 2000 | CVPR | A Fast and Robust Approach to Recovering Structure and Motion from Live Video Frames. | Takeshi Kurata, Jun Fujiki, Masakatsu Kourogi, Katsuhiko Sakaue |
| 2000 | ICPR | Recursive Factorization Method for the Paraperspective Model Based on the Perspective Projection. | Jun Fujiki, Takeshi Kurata |
| 1998 | ICPR | Affine epipolar geometry via factorization method. | Takeshi Kurata, Jun Fujiki, Katsuhiko Sakaue |