| 2025 | AAAI | mRNA2vec: mRNA Embedding with Language Model in the 5'UTR-CDS for mRNA Design. | Honggen Zhang, Xiangrui Gao, June Zhang, Lipeng Lai |
| 2024 | ISITA | Out-of-Distribution Detection Using Maximum Entropy Coding and Generative Networks. | Mojtaba Abolfazli, Mohammad Zaeri Amirani, Anders Hst-Madsen, June Zhang, Andras Bratincsak |
| 2024 | WWW | HaSa: Hardness and Structure-Aware Contrastive Knowledge Graph Embedding. | Honggen Zhang, June Zhang, Igor Molybog |
| 2021 | ISIT | Graph Coding for Model Selection and Anomaly Detection in Gaussian Graphical Models. | Mojtaba Abolfazli, Anders Hst-Madsen, June Zhang, Andras Bratincsak |
| 2020 | ISITA | Differential Description Length for Hyperparameter Selection in Supervised Learning. | Mojtaba Abolfazli, Anders Hst-Madsen, June Zhang |
| 2018 | ICASSP | Greedy Algorithm with Approximation Ratio for Sampling Noisy Graph Signals. | Changlong Wu, Wenxin Chen, June Zhang |
| 2018 | ICASSP | Who is More at Risk in Heterogenous Networks? | June Zhang, Jos M. F. Moura |
| 2018 | ISIT | Coding of Graphs with Application to Graph Anomaly Detection. | Anders Hst-Madsen, June Zhang |
| 2016 | ICASSP | Finding unique dense communities. | June Zhang, Jos M. F. Moura |
| 2015 | ACSSC | Individual vs. network preferences. | June Zhang, Jos M. F. Moura |
| 2014 | ICASSP | Subgraph density and epidemics over networks. | June Zhang, Jos M. F. Moura |
| 2013 | ICASSP | Threshold behavior of epidemics in regular networks. | June Zhang, Jos M. F. Moura |
| 2012 | ICASSP | Accounting for topology in spreading contagion in non-complete networks. | June Zhang, Jos M. F. Moura |