| 2018 | MICCAI | Segmentation of Renal Structures for Image-Guided Surgery. | Junning Li, Pechin Lo, Ahmed Taha, Hang Wu, Tao Zhao |
| 2018 | MICCAI | Kid-Net: Convolution Networks for Kidney Vessels Segmentation from CT-Volumes. | Ahmed Taha, Pechin Lo, Junning Li, Tao Zhao |
| 2014 | MICCAI | Diffusion of Fiber Orientation Distribution Functions with a Rotation-Induced Riemannian Metric. | Junning Li, Yonggang Shi, Arthur W. Toga |
| 2014 | MICCAI | Persistent Reeb Graph Matching for Fast Brain Search. | Yonggang Shi, Junning Li, Arthur W. Toga |
| 2013 | MICCAI | Voxelwise Spectral Diffusional Connectivity and Its Applications to Alzheimer's Disease and Intelligence Prediction. | Junning Li, Yan Jin, Yonggang Shi, Ivo D. Dinov, Danny J. J. Wang, Arthur W. Toga, Paul M. Thompson |
| 2013 | MICCAI | Locally Weighted Multi-atlas Construction. | Junning Li, Yonggang Shi, Ivo D. Dinov, Arthur W. Toga |
| 2012 | MICCAI | Automatic Population HARDI White Matter Tract Clustering by Label Fusion of Multiple Tract Atlases. | Yan Jin, Yonggang Shi, Liang Zhan, Junning Li, Greig I. de Zubicaray, Katie McMahon, Nicholas G. Martin, Margaret J. Wright, Paul M. Thompson |
| 2012 | MICCAI | Fast Diffusion Tensor Registration with Exact Reorientation and Regularization. | Junning Li, Yonggang Shi, Giang Tran, Ivo D. Dinov, Danny J. J. Wang, Arthur W. Toga |
| 2008 | ICASSP | Controlling the false discovery rate in modeling brain functional connectivity. | Junning Li, Z. Jane Wang, Martin J. McKeown |
| 2007 | ICASSP | A Multi-Subject, Dynamic Bayesian Networks (DBNS) Framework for Brain Effective Connectivity. | Junning Li, Z. Jane Wang, Martin J. McKeown |
| 2007 | ICASSP | Local Linear Discriminant Analysis (LLDA) for Inference of Multisubject FMRI Data. | Martin J. McKeown, Junning Li, Xuemei Huang, Z. Jane Wang |
| 2006 | ICASSP | Bayesian Network Modeling For Discovering "Directed Synergies" Among Muscles in Reaching Movements. | Junning Li, Z. Jane Wang, Martin J. McKeown |