| 2026 | GECCO | Tensor-Accelerated Eager Multi-Resolution Grids for Evolving Large-Scale Substrates. | Romain Claret, Michael O'Neill, Paul Cotofrei, Kilian Stoffel |
| 2024 | GECCO | Investigating Hyperparameter Optimization and Transferability for ES-HyperNEAT: A TPE Approach. | Romain Claret, Michael O'Neill, Paul Cotofrei, Kilian Stoffel |
| 2020 | AICCSA | Pattern Matching in Meter Detection of Arabic Classical Poetry. | Abdelmalek Berkani, Adrian Holzer, Kilian Stoffel |
| 2018 | SEKE | Object-oriented Software Modeling with Ontologies Around - A Survey of Existing Approaches. | Sohaila Baset, Kilian Stoffel |
| 2015 | CEC | Using association rules to guide evolutionary search in solving constraint satisfaction. | Madalina Raschip, Cornelius Croitoru, Kilian Stoffel |
| 2015 | GECCO | Guiding Evolutionary Search with Association Rules for Solving Weighted CSPs. | Madalina Raschip, Cornelius Croitoru, Kilian Stoffel |
| 2013 | DATA | A Clustering Topology for Wireless Sensor Networks - New Semantics over Network Topology. | Paul Cotofrei, Ionel Tudor Calistru, Kilian Stoffel |
| 2013 | ISI | Crime linkage: A fuzzy MCDM approach. | Fabrizio Albertetti, Paul Cotofrei, Lionel Grossrieder, Olivier Ribaux, Kilian Stoffel |
| 2012 | AINA | Ontology Based Qualitative Methodology for Chinese Language Analysis. | Dong Han, Kilian Stoffel |
| 2007 | KDD | Stochastic processes and temporal data mining. | Paul Cotofrei, Kilian Stoffel |
| 2006 | ECAI | Web-Based Tools for Codification with Medical Ontologies in Switzerland. | Thorsten Kurz, Kilian Stoffel |
| 2006 | GRC | Stochastic processes and temporal rules. | Paul Cotofrei, Kilian Stoffel |
| 2005 | DEXA | Provable Data Privacy. | Kilian Stoffel, Thomas Studer |
| 2005 | GRC | Temporal granular logic for temporal data mining. | Paul Cotofrei, Kilian Stoffel |
| 2004 | DaWaK | From Temporal Rules to Temporal Meta-rules. | Paul Cotofrei, Kilian Stoffel |
| 2003 | ICCS | Higher Order Temporal Rules. | Paul Cotofrei, Kilian Stoffel |
| 2002 | ICCS | Classification Rules + Time = Temporal Rules. | Paul Cotofrei, Kilian Stoffel |
| 2002 | ISAIM | Theoretical Comparison between the Gini Index and Information Gain Criteria. | Laura Elena Raileanu, Kilian Stoffel |
| 1999 | EuroPar | Parallel | Kilian Stoffel, Abdelkader Belkoniene |
| 1998 | AMIA | A graphical tool for ad hoc query generation. | Kilian Stoffel, John D. Davis, Gerald Rottman, Joel H. Saltz, James Dick, William Merz, Robert Miller |
| 1997 | AAAI | Efficient Management of Very Large Ontologies. | Kilian Stoffel, Merwyn G. Taylor, James A. Hendler |
| 1997 | AMIA | Semantic Indexing for Complex Patient Grouping. | Kilian Stoffel, Joel H. Saltz, Jim Hendler, James Dick, William Merz, Robert Miller |