| 2014 | SC | Petascale Tcl with NAMD, VMD, and Swift/T. | James C. Phillips, John E. Stone, Kirby L. Vandivort, Timothy G. Armstrong, Justin M. Wozniak, Michael Wilde, Klaus Schulten |
| 2013 | SC | GPU-accelerated molecular visualization on petascale supercomputing platforms. | John E. Stone, Kirby L. Vandivort, Klaus Schulten |
| 2011 | ISVC | Immersive Out-of-Core Visualization of Large-Size and Long-Timescale Molecular Dynamics Trajectories. | John E. Stone, Kirby L. Vandivort, Klaus Schulten |
| 2010 | ISVC | Immersive Molecular Visualization and Interactive Modeling with Commodity Hardware. | John E. Stone, Axel Kohlmeyer, Kirby L. Vandivort, Klaus Schulten |
| 2009 | ASPLOS | High performance computation and interactive display of molecular orbitals on GPUs and multi-core CPUs. | John E. Stone, Jan Saam, David J. Hardy, Kirby L. Vandivort, Wen-mei W. Hwu, Klaus Schulten |
| 2008 | SC | Adapting a message-driven parallel application to GPU-accelerated clusters. | James C. Phillips, John E. Stone, Klaus Schulten |
| 1999 | RECOMB | Evolution of metabolisms: a new method for the comparison of metabolic pathways. | Christian V. Forst, Klaus Schulten |
| 1996 | ICPR | Speech/gesture interface to a visual computing environment for molecular biologists. | Rajeev Sharma, Thomas S. Huang, Vladimir I. Pavlovic, Yunxin Zhao, Zion Lo, Stephen M. Chu, Klaus Schulten |
| 1991 | WI | Vector Quantization Algorithm for Time Series Prediction and Visuo-Motor Control of Robots. | Stan Berkovitch, Philippe Dalger, Ted Hesselroth, Thomas Martinetz, Benot Nol, Jrg A. Walter, Klaus Schulten |
| 1990 | IJCNN | Hierarchical neural net for learning control of a robot's arm and gripper. | Thomas Martinetz, Klaus Schulten |
| 1990 | IJCNN | A neural network model for the formation of topographic maps in the CNS: development of receptive fields. | Klaus Obermayer, Helge J. Ritter, Klaus Schulten |
| 1990 | IJCNN | Nonlinear prediction with self-organizing maps. | Jrg A. Walter, Helge J. Ritter, Klaus Schulten |