| 2013 | MICCAI | Improved Colon Navigation for Efficient Polyp Detection in Virtual Colonoscopy. | Marwa Ismail, Aly A. Farag, M. Sabry Hassouna, Gerald W. Dryden, Robert Falk |
| 2007 | ICCV | On the Extraction of Curve Skeletons using Gradient Vector Flow. | M. Sabry Hassouna, Aly A. Farag |
| 2007 | ICIP | Geometric Features Based Framework for Colonic Polyp Detection using a New Color Coding Scheme. | Dongqing Chen, Aly A. Farag, M. Sabry Hassouna, Robert Falk, Gerald W. Dryden |
| 2006 | CVPR | Accurate Tracking of Monotonically Advancing Fronts. | M. Sabry Hassouna, Aly A. Farag |
| 2006 | MICCAI | Virtual Fly-Over: A New Visualization Technique for Virtual Colonoscopy. | M. Sabry Hassouna, Aly A. Farag, Robert Falk |
| 2005 | CVPR | Robust Centerline Extraction Framework Using Level Sets. | M. Sabry Hassouna, Aly A. Farag |
| 2005 | ICIP | Robust robotic path planning using level sets. | M. Sabry Hassouna, Alaa E. Abdel-Hakim, Aly A. Farag |
| 2005 | ICIP | Stochastic segmentation of blood vessels from time-of-flight. | M. Sabry Hassouna, Aly A. Farag |
| 2005 | ICIP | Robust skeletonization using the fast marching method. | M. Sabry Hassouna, Aly A. Farag |
| 2005 | MICCAI | Differential Fly-Throughs (DFT): A General Framework for Computing Flight Paths. | M. Sabry Hassouna, Aly A. Farag, Robert Falk |
| 2003 | MICCAI | Statistical-Based Approach for Extracting 3D Blood Vessels from TOF-MyRA Data. | M. Sabry Hassouna, Aly A. Farag, Stephen G. Hushek, Thomas Moriarty |