| 2018 | CIARP | Automated Identification and Classification of Diatoms from Water Resources. | Jose Alejandro Libreros, Gloria Bueno, Mara P. Trujillo, Maria Ospina |
| 2016 | CIARP | Automatic Classification of Non-informative Frames in Colonoscopy Videos Using Texture Analysis. | Cristian Ballesteros, Mara P. Trujillo, Claudia Mazo, Deisy Chaves, Jesus Arbey Hoyos |
| 2015 | CIARP | An EA-Based Method for Estimating the Fundamental Matrix. | Daniel Barragan, Mara P. Trujillo, Ivan Cabezas |
| 2015 | IWINAC | Global and Local Features for Char Image Classification. | Deisy Chaves, Mara P. Trujillo, Juan Barraza |
| 2015 | MICCAI | Enhancing Normal-Abnormal Classification Accuracy in Colonoscopy Videos via Temporal Consistency. | Gustavo A. Puerto Souza, Siyamalan Manivannan, Mara P. Trujillo, Jesus Arbey Hoyos, Emanuele Trucco, Gian Luca Mariottini |
| 2014 | CIARP | Evaluating Robustness of Template Matching Algorithms as a Multi-objective Optimisation Problem. | Jos Bernal, Mara P. Trujillo, Ivan Cabezas |
| 2014 | CIARP | Automatic Classification of Coating Epithelial Tissue. | Claudia Mazo, Mara P. Trujillo, Liliana Salazar |
| 2014 | MICCAI | Video-Specific SVMs for Colonoscopy Image Classification. | Siyamalan Manivannan, Ruixuan Wang, Mara P. Trujillo, Jesus Arbey Hoyos, Emanuele Trucco |
| 2013 | CIARP | Identifying Loose Connective and Muscle Tissues on Histology Images. | Claudia Mazo, Mara P. Trujillo, Liliana Salazar |
| 2012 | CIARP | A Method for Reducing the Cardinality of the Pareto Front. | Ivan Cabezas, Mara P. Trujillo |
| 2012 | CIARP | An Automatic Segmentation Approach of Epithelial Cells Nuclei. | Claudia Mazo, Mara P. Trujillo, Liliana Salazar |
| 2011 | CIARP | A Measure for Accuracy Disparity Maps Evaluation. | Ivan Cabezas, Victor Padilla, Mara P. Trujillo |
| 2008 | CBMI | MPEG-7 service oriented system - MPEG-7 SOS. | Margaret Florian, Mara P. Trujillo |