| 2025 | SIGdial | A Topicality-Driven QUD Model for Discourse Processing. | Yingxue Fu, Mark-Jan Nederhof, Anas Ollagnier |
| 2023 | ICDAR | Collaborative Annotation and Computational Analysis of Hieratic. | Julius Tabin, Mark-Jan Nederhof, Christian Casey |
| 2021 | EACL | Calculating the optimal step of arc-eager parsing for non-projective trees. | Mark-Jan Nederhof |
| 2017 | LATA | A Derivational Model of Discontinuous Parsing. | Mark-Jan Nederhof, Anssi Yli-Jyr |
| 2016 | ACL | A short proof that O_2 is an MCFL. | Mark-Jan Nederhof |
| 2014 | COLING | Hybrid Grammars for Discontinuous Parsing. | Mark-Jan Nederhof, Heiko Vogler |
| 2014 | EACL | Deterministic Parsing using PCFGs. | Mark-Jan Nederhof, Martin McCaffery |
| 2013 | CC | On LR Parsing with Selective Delays. | Eberhard Bertsch, Mark-Jan Nederhof, Sylvain Schmitz |
| 2011 | ACL | Prefix Probability for Probabilistic Synchronous Context-Free Grammars. | Mark-Jan Nederhof, Giorgio Satta |
| 2011 | EMNLP | Computation of Infix Probabilities for Probabilistic Context-Free Grammars. | Mark-Jan Nederhof, Giorgio Satta |
| 2010 | ACL | Transforming Lexica as Trees. | Mark-Jan Nederhof |
| 2006 | LREC | LEXUS, a web-based tool for manipulating lexical resources lexicon. | Marc Kemps-Snijders, Mark-Jan Nederhof, Peter Wittenburg |
| 2006 | NAACL | Estimation of Consistent Probabilistic Context-free Grammars. | Mark-Jan Nederhof, Giorgio Satta |
| 2004 | ACL | Probabilistic Parsing Strategies. | Mark-Jan Nederhof, Giorgio Satta |
| 2004 | ACL | An Alternative Method of Training Probabilistic LR Parsers. | Mark-Jan Nederhof, Giorgio Satta |
| 2004 | COLING | Kullback-Leibler Distance between Probabilistic Context-Free Grammars and Probabilistic Finite Automata. | Mark-Jan Nederhof, Giorgio Satta |
| 2002 | ACL | Parsing non-recursive CFGs. | Mark-Jan Nederhof, Giorgio Satta |
| 2001 | ACL | Approximating Context-Free by Rational Transduction for Example-Based MT. | Mark-Jan Nederhof |
| 1998 | ACL | An Alternative LR Algorithm for TAGs. | Mark-Jan Nederhof |
| 1998 | ACL | Prefix Probabilities from Stochastic Tree Adjoining Grammars. | Mark-Jan Nederhof, Anoop Sarkar, Giorgio Satta |
| 1997 | EACL | Grammatical analysis in the OVIS spoken-dialogue system. | Mark-Jan Nederhof, Gosse Bouma, Rob Koeling, Gertjan van Noord |
| 1996 | ACL | Efficient Tabular LR Parsing. | Mark-Jan Nederhof, Giorgio Satta |
| 1995 | DLT | Reversible Pushdown Automata and Bidirectional Parsing. | Mark-Jan Nederhof |
| 1994 | ACL | An Optimal Tabular Parsing Algorithm. | Mark-Jan Nederhof |
| 1994 | ACL | An Extended Theory of Head-Driven Parsing. | Mark-Jan Nederhof, Giorgio Satta |
| 1993 | EACL | Generalized Left-Corner Parsing. | Mark-Jan Nederhof |