| 2013 | ETFA | Prototyping the Internet of Things for the future factory using a SOA-based middleware and reliable WSNs. | Ferry Pramudianto, Jonathan Simon, Markus Eisenhauer, Hussein Khaleel, Claudio Pastrone, Maurizio A. Spirito |
| 2012 | ICSE | First results from an investigation into the validity of developer reputation derived from wiki articles and source code. | Christian Prause, Markus Eisenhauer |
| 2010 | SECON | Middleware for Wireless Devices and Sensors - Energy Efficiency at Device Level. | Markus Eisenhauer, Christian Prause, Marco Jahn, Marc Jentsch |
| 2008 | ICGSE | Managing the Iterative Requirements Process in a Multi-national Project Using an Issue Tracker. | Christian Prause, Marius Scholten, Andreas Zimmermann, Ren Reiners, Markus Eisenhauer |
| 2008 | ICSE | Social aspects of a continuous inspection platform for software source code. | Christian Prause, Markus Eisenhauer |
| 2003 | HCI | Mobile information systems for all. | Markus Eisenhauer, Reinhard Oppermann, Barbara Schmidt-Belz |
| 2003 | HCI | A user evaluation study of a multi-modal mobile navigation aid. | Johan de Heer, Markus Eisenhauer, Vasilios Siochos |
| 2003 | HCI | Shared initiative: Cross-fertilisation between system adaptivity and adaptability. | Marcus Klann, Markus Eisenhauer, Reinhard Oppermann, Volker Wulf |