| 2020 | ISCC | K-Cipher: A Low Latency, Bit Length Parameterizable Cipher. | Michael E. Kounavis, Sergej Deutsch, Santosh Ghosh, David Durham |
| 2019 | ISCC | Mitigating Both Data Corruption and Content Replay Attacks with Implicit Data Integrity. | Michael E. Kounavis |
| 2019 | ISCC | IVP: A Three Level Confusion-Diffusion Network Supporting Implicit Data Integrity. | Michael E. Kounavis, David Durham, Sergej Deutsch, Ken Grewal |
| 2018 | KDD | SHIELD: Fast, Practical Defense and Vaccination for Deep Learning using JPEG Compression. | Nilaksh Das, Madhuri Shanbhogue, Shang-Tse Chen, Fred Hohman, Siwei Li, Li Chen, Michael E. Kounavis, Duen Horng Chau |
| 2017 | IJCNN | The object class intrinsic filter conjecture. | Michael E. Kounavis |
| 2017 | ISCC | Non-recursive computation of the probability of more than two people having the same birthday. | Michael E. Kounavis, Sergej Deutsch, David Durham, Saeedeh Komijani |
| 2017 | SMC | Fingertip detection without the use of depth data, color information, or large training data sets. | Michael E. Kounavis |
| 2011 | ISCC | Detecting non-transient anomalies in visual information using neural networks. | Michael E. Kounavis, Joel Morrissette, Sadagopan Srinivasan, Raj Yavatkar |
| 2010 | ISCC | Mitigating collision and preimage attacks against the generalized MDC-2 mode of operation. | Shay Gueron, Michael E. Kounavis |
| 2010 | ISCC | System-wide anatomy and tuning of a SPECweb SSL server. | Xiaozhu Kang, Michael E. Kounavis, David Durham |
| 2010 | SIGCOMM | Encrypting the internet. | Michael E. Kounavis, Xiaozhu Kang, Ken Grewal, Mathew Eszenyi, Shay Gueron, David Durham |
| 2008 | ISCC | Fast multiplication techniques for public key cryptography. | Vinodh Gopal, Satyajit Grover, Michael E. Kounavis |
| 2008 | SECRYPT | An Event-Driven, Inclusionary and Secure Approach to Kernel Integrity. | Satyajit Grover, Divya Naidu Kolar Sunder, Samuel O. Moffatt, Michael E. Kounavis |
| 2007 | INFOCOM | Sorting Packets by Packet Schedulers Using a Connected Trie Data Structure. | Michael E. Kounavis, Alok Kumar, Raj Yavatkar |
| 2005 | FAST | A Scalable and High Performance Software iSCSI Implementation. | Abhijeet Joglekar, Michael E. Kounavis, Frank L. Berry |
| 2005 | ISCC | A Systematic Approach to Building High Performance Software-Based CRC Generators. | Michael E. Kounavis, Frank L. Berry |