| 2025 | AAAI | Gradient-Based Sample Selection for Black-Box Universal Domain Adaptation. | Qiuyan He, Minghua Deng |
| 2025 | ACL | MARK: Multi-agent Collaboration with Ranking Guidance for Text-attributed Graph Clustering. | Yiwei Fu, Yuxing Zhang, Chunchun Chen, JianwenMa JianwenMa, Quan Yuan, Rong-Cheng Tu, Xinli Huang, Wei Ye, Xiao Luo, Minghua Deng |
| 2024 | IJCAI | Distribution-Independent Cell Type Identification for Single-Cell RNA-seq Data. | Yuyao Zhai, Liang Chen, Minghua Deng |
| 2023 | AAAI | Generalized Cell Type Annotation and Discovery for Single-Cell RNA-Seq Data. | Yuyao Zhai, Liang Chen, Minghua Deng |
| 2023 | IJCAI | Realistic Cell Type Annotation and Discovery for Single-cell RNA-seq Data. | Yuyao Zhai, Liang Chen, Minghua Deng |
| 2022 | AAAI | Mutual Nearest Neighbor Contrast and Hybrid Prototype Self-Training for Universal Domain Adaptation. | Liang Chen, Qianjin Du, Yihang Lou, Jianzhong He, Tao Bai, Minghua Deng |
| 2022 | AAAI | Evidential Neighborhood Contrastive Learning for Universal Domain Adaptation. | Liang Chen, Yihang Lou, Jianzhong He, Tao Bai, Minghua Deng |
| 2022 | AAAI | Neighborhood Consensus Contrastive Learning for Backward-Compatible Representation. | Shengsen Wu, Liang Chen, Yihang Lou, Yan Bai, Tao Bai, Minghua Deng, Ling-Yu Duan |
| 2022 | CVPR | Geometric Anchor Correspondence Mining with Uncertainty Modeling for Universal Domain Adaptation. | Liang Chen, Yihang Lou, Jianzhong He, Tao Bai, Minghua Deng |
| 2022 | ICASSP | DHWP: Learning High-Quality Short Hash Codes Via Weight Pruning. | Zeyu Ma, Yuhang Guo, Xiao Luo, Chong Chen, Minghua Deng, Wei Cheng, Guangming Lu |
| 2022 | ICDE | DualGraph: Improving Semi-supervised Graph Classification via Dual Contrastive Learning. | Xiao Luo, Wei Ju, Meng Qu, Chong Chen, Minghua Deng, Xian-Sheng Hua, Ming Zhang |
| 2022 | IJCAI | TGNN: A Joint Semi-supervised Framework for Graph-level Classification. | Wei Ju, Xiao Luo, Meng Qu, Yifan Wang, Chong Chen, Minghua Deng, Xian-Sheng Hua, Ming Zhang |
| 2022 | IJCAI | Improved Deep Unsupervised Hashing with Fine-grained Semantic Similarity Mining for Multi-Label Image Retrieval. | Zeyu Ma, Xiao Luo, Yingjie Chen, Mixiao Hou, Jinxing Li, Minghua Deng, Guangming Lu |
| 2021 | ICCV | Graph Contrastive Clustering. | Huasong Zhong, Jianlong Wu, Chong Chen, Jianqiang Huang, Minghua Deng, Liqiang Nie, Zhouchen Lin, Xian-Sheng Hua |
| 2021 | ICDM | Composition-Enhanced Graph Collaborative Filtering for Multi-behavior Recommendation. | Daqing Wu, Xiao Luo, Zeyu Ma, Chong Chen, Pengfei Wang, Minghua Deng, Jinwen Ma |
| 2021 | ICONIP | Deep Supervised Hashing by Classification for Image Retrieval. | Xiao Luo, Yuhang Guo, Zeyu Ma, Huasong Zhong, Tao Li, Wei Ju, Chong Chen, Minghua Deng |
| 2021 | ICONIP | Concordant Contrastive Learning for Semi-supervised Node Classification on Graph. | Daqing Wu, Xiao Luo, Xiangyang Guo, Chong Chen, Minghua Deng, Jinwen Ma |
| 2021 | IJCAI | CIMON: Towards High-quality Hash Codes. | Xiao Luo, Daqing Wu, Zeyu Ma, Chong Chen, Minghua Deng, Jinwen Ma, Zhongming Jin, Jianqiang Huang, Xian-Sheng Hua |
| 2021 | IJCNN | ARGO: Modeling Heterogeneity in E-commerce Recommendation. | Daqing Wu, Xiao Luo, Zeyu Ma, Chong Chen, Minghua Deng, Jinwen Ma |
| 2021 | ICTAI | An Interpretation of Convolutional Neural Networks for Motif Finding from the View of Probability. | Weinan Wang, Yuhang Guo, Wei Ju, Xiao Luo, Minghua Deng |
| 2012 | RECOMB | Alignment-Free Sequence Comparison Based on Next Generation Sequencing Reads: Extended Abstract. | Kai Song, Jie Ren, Zhiyuan Zhai, Xuemei Liu, Minghua Deng, Fengzhu Sun |
| 2009 | ICNC | Feature-Based Causal Structure Discovery in Protein and Gene Expression Data with Bayesian Network. | Jingwei Liu, Minghua Deng, Minping Qian |
| 2004 | PSB | Kernel-Based Data Fusion and Its Application to Protein Function Prediction in Yeast. | Gert R. G. Lanckriet, Minghua Deng, Nello Cristianini, Michael I. Jordan, William Stafford Noble |
| 2004 | SNPD | An Improvement for Eulerian Path of Assembly. | Shenglan Peng, Minghua Deng, Minping Qian |
| 2003 | PSB | Assessment of the reliability of protein-protein interactions and protein function prediction. | Minghua Deng, Fengzhu Sun, Ting Chen |
| 2003 | RECOMB | An integrated probabilistic model for functional prediction of proteins. | Minghua Deng, Ting Chen, Fengzhu Sun |
| 2002 | RECOMB | Inferring domain-domain interactions from protein-protein interactions. | Minghua Deng, Shipra Mehta, Fengzhu Sun, Ting Chen |
| 2000 | ICMI | A Novel Algorithm for Handwritten Chinese Character Recognition. | Feng Qi, Minghua Deng, Minping Qian, Xueqing Zhu |