| 2024 | AIME | Mining Disease Progression Patterns for Advanced Disease Surveillance. | Syed Hamail Hussain Zaidi, Amna Basharat, Muddassar Farooq |
| 2023 | AIME | Boosted Random Forests for Predicting Treatment Failure of Chemotherapy Regimens. | Muhammad Usamah Shahid, Muddassar Farooq |
| 2017 | WCNC | Analyzing Directional Modulation Techniques as Block Encryption Ciphers for Physical Layer Security. | Abrar Ahmad, Muhammad Amin, Muddassar Farooq |
| 2011 | GECCO | Using evolutionary learning classifiers to do MobileSpam (SMS) filtering. | Muhammad Bilal Junaid, Muddassar Farooq |
| 2011 | ICNC | Using evolutionary algorithms for ECG Arrhythmia detection and classification. | Komal Waseem, Awais Javed, Rashad Ramzan, Muddassar Farooq |
| 2010 | NOSSDAV | RTP-miner: a real-time security framework for RTP fuzzing attacks. | Muhammad Ali Akbar, Muddassar Farooq |
| 2010 | PPSN | Using Computational Intelligence to Identify Performance Bottlenecks in a Computer System. | Faraz Ahmed, Farrukh Shahzad, Muddassar Farooq |
| 2009 | AIME | The Role of Biomedical Dataset in Classification. | Ajay Kumar Tanwani, Muddassar Farooq |
| 2009 | CCS | Using spatio-temporal information in API calls with machine learning algorithms for malware detection. | Faraz Ahmed, Haider Hameed, M. Zubair Shafiq, Muddassar Farooq |
| 2009 | GECCO | Application of evolutionary algorithms in detection of SIP based flooding attacks. | Muhammad Ali Akbar, Muddassar Farooq |
| 2009 | GECCO | Bio-inspired telecommunications. | Muddassar Farooq |
| 2009 | GECCO | IMAD: in-execution malware analysis and detection. | Syed Bilal Mehdi, Ajay Kumar Tanwani, Muddassar Farooq |
| 2009 | GECCO | Evolvable malware. | Sadia Noreen, Shafaq Murtaza, M. Zubair Shafiq, Muddassar Farooq |
| 2009 | GECCO | Are evolutionary rule learning algorithms appropriate for malware detection? | M. Zubair Shafiq, S. Momina Tabish, Muddassar Farooq |
| 2009 | GECCO | On the appropriateness of evolutionary rule learning algorithms for malware detection. | M. Zubair Shafiq, S. Momina Tabish, Muddassar Farooq |
| 2009 | GECCO | A hybrid GA-PSO fuzzy system for user identification on smart phones. | Muhammad Shahzad, Saira Zahid, Muddassar Farooq |
| 2009 | GECCO | Performance evaluation of evolutionary algorithms in classification of biomedical datasets. | Ajay Kumar Tanwani, Muddassar Farooq |
| 2009 | GLOBECOM | Evaluating DoS Attacks against Sip-Based VoIP Systems. | M. Zubair Rafique, Muhammad Ali Akbar, Muddassar Farooq |
| 2009 | KDD | Malware detection using statistical analysis of byte-level file content. | S. Momina Tabish, M. Zubair Shafiq, Muddassar Farooq |
| 2009 | RAID | Using Formal Grammar and Genetic Operators to Evolve Malware. | Sadia Noreen, Shafaq Murtaza, M. Zubair Shafiq, Muddassar Farooq |
| 2009 | RAID | PE-Miner: Mining Structural Information to Detect Malicious Executables in Realtime. | M. Zubair Shafiq, S. Momina Tabish, Fauzan Mirza, Muddassar Farooq |
| 2009 | RAID | Keystroke-Based User Identification on Smart Phones. | Saira Zahid, Muhammad Shahzad, Syed Ali Khayam, Muddassar Farooq |
| 2008 | DIMVA | Embedded Malware Detection Using Markov n-Grams. | M. Zubair Shafiq, Syed Ali Khayam, Muddassar Farooq |
| 2008 | GECCO | Attack analysis & bio-inspired security framework for IP multimedia subsystem. | Aliya Awais, Muddassar Farooq, Muhammad Younus Javed |
| 2008 | GECCO | Attack analysis & bio-inspired security framework for IPMultimedia subsystem. | Aliya Awais, Muddassar Farooq, Muhammad Younus Javed |
| 2008 | GECCO | A sense of danger: dendritic cells inspired artificial immune system for manet security. | Nauman Mazhar, Muddassar Farooq |
| 2008 | GECCO | A formal performance modeling framework for bio-inspired ad hoc routing protocols. | Muhammad Saleem, Syed Ali Khayam, Muddassar Farooq |
| 2008 | GECCO | Improving accuracy of immune-inspired malware detectors by using intelligent features. | M. Zubair Shafiq, Syed Ali Khayam, Muddassar Farooq |
| 2008 | PPSN | A Scalable Formal Framework for Analyzing the Behavior of Nature-Inspired Routing Protocols. | Muhammad Shahzad, Saira Zahid, Muddassar Farooq |
| 2007 | CEC | A framework for empirical evaluation of nature inspired routing protocols for wireless sensor networks. | Muhammad Saleem, Muddassar Farooq |
| 2007 | CEC | Extended thymus action for improving response of AIS based NID system against malicious traffic. | M. Zubair Shafiq, Mehrin Kiani, Bisma Hashmi, Muddassar Farooq |
| 2007 | CEC | A comprehensive formal framework for analyzing the behavior of nature-inspired routing protocols. | Saira Zahid, Muhammad Shahzad, Syed Usman Ali, Muddassar Farooq |
| 2007 | GECCO | Vulnerability analysis and security framework (BeeSec) for nature inspired MANET routing protocols. | Nauman Mazhar, Muddassar Farooq |
| 2007 | GECCO | Extended thymus action for reducing false positives in ais based network intrusion detection systems. | M. Zubair Shafiq, Mehrin Kiani, Bisma Hashmi, Muddassar Farooq |
| 2006 | PPSN | BeeHiveAIS: A Simple, Efficient, Scalable and Secure Routing Framework Inspired by Artificial Immune Systems. | Horst F. Wedde, Constantin Timm, Muddassar Farooq |
| 2005 | GECCO | BeeAdHoc: an energy efficient routing algorithm for mobile ad hoc networks inspired by bee behavior. | Horst F. Wedde, Muddassar Farooq, Thorsten Pannenbaecker, Bjoern Vogel, Christian Mueller, Johannes Meth, Ren Jeruschkat |
| 2004 | GECCO | An Evolutionary Meta Hierarchical Scheduler for the Linux Operating System. | Horst F. Wedde, Muddassar Farooq, Mario Lischka |