| 2026 | AAAI | Spectral Basis Learning for Expressive Graph Neural Networks in Link Prediction. | Niloofar Azizi, Nils M. Kriege, Nicholas J. A. Harvey, Horst Bischof |
| 2025 | ICANN | Visualization and Analysis of the Loss Landscape in Graph Neural Networks. | Samir Moustafa, Lorenz Kummer, Simon Fetzel, Nils M. Kriege, Wilfried N. Gansterer |
| 2025 | ICDE | Efficient Mixed Precision Quantization in Graph Neural Networks. | Samir Moustafa, Nils M. Kriege, Wilfried N. Gansterer |
| 2025 | ICDM | Sc-GRIP: a Graph Convolutional Approach to Infer Gene Interaction Polarity from Single-Cell Data. | Carolina E. Atria, Yitao Cai, Pascal Weber, Anna Beer, Nils M. Kriege, Christian Boehm, Roger Revilla-i-Domingo, Claudia Plant |
| 2024 | KDD | Attacking Graph Neural Networks with Bit Flips: Weisfeiler and Leman Go Indifferent. | Lorenz Kummer, Samir Moustafa, Sebastian Schrittwieser, Wilfried N. Gansterer, Nils M. Kriege |
| 2023 | KDD | A Higher-Order Temporal H-Index for Evolving Networks. | Lutz Oettershagen, Nils M. Kriege, Petra Mutzel |
| 2023 | SDM | A Temporal Graphlet Kernel For Classifying Dissemination in Evolving Networks. | Lutz Oettershagen, Nils M. Kriege, Claude Jordan, Petra Mutzel |
| 2022 | WWW | Temporal Walk Centrality: Ranking Nodes in Evolving Networks. | Lutz Oettershagen, Petra Mutzel, Nils M. Kriege |
| 2021 | IJCAI | The Power of the Weisfeiler-Leman Algorithm for Machine Learning with Graphs. | Christopher Morris, Matthias Fey, Nils M. Kriege |
| 2021 | SISAP | Metric Indexing for Graph Similarity Search. | Franka Bause, David B. Blumenthal, Erich Schubert, Nils M. Kriege |
| 2020 | ICLR | Deep Graph Matching Consensus. | Matthias Fey, Jan Eric Lenssen, Christopher Morris, Jonathan Masci, Nils M. Kriege |
| 2020 | SDM | Temporal Graph Kernels for Classifying Dissemination Processes. | Lutz Oettershagen, Nils M. Kriege, Christopher Morris, Petra Mutzel |
| 2019 | ESANN | Deep Weisfeiler-Lehman assignment kernels via multiple kernel learning. | Nils M. Kriege |
| 2019 | ICDM | Computing Optimal Assignments in Linear Time for Approximate Graph Matching. | Nils M. Kriege, Pierre-Louis Giscard, Franka Bause, Richard C. Wilson |
| 2019 | SISAP | Protein Complex Similarity Based on Weisfeiler-Lehman Labeling. | Bianca K. Stcker, Till Schfer, Petra Mutzel, Johannes Kster, Nils M. Kriege, Sven Rahmann |
| 2018 | IJCAI | A Property Testing Framework for the Theoretical Expressivity of Graph Kernels. | Nils M. Kriege, Christopher Morris, Anja Rey, Christian Sohler |
| 2018 | IWOCA | A Fixed-Parameter Algorithm for the Max-Cut Problem on Embedded 1-Planar Graphs. | Christine Dahn, Nils M. Kriege, Petra Mutzel |
| 2018 | MFCS | Largest Weight Common Subtree Embeddings with Distance Penalties. | Andre Droschinsky, Nils M. Kriege, Petra Mutzel |
| 2018 | SDM | Recognizing Cuneiform Signs Using Graph Based Methods. | Nils M. Kriege, Matthias Fey, Denis Fisseler, Petra Mutzel, Frank Weichert |
| 2017 | SOFSEM | Finding Largest Common Substructures of Molecules in Quadratic Time. | Andre Droschinsky, Nils M. Kriege, Petra Mutzel |
| 2016 | ICDM | Faster Kernels for Graphs with Continuous Attributes via Hashing. | Christopher Morris, Nils M. Kriege, Kristian Kersting, Petra Mutzel |
| 2016 | MFCS | Faster Algorithms for the Maximum Common Subtree Isomorphism Problem. | Andre Droschinsky, Nils M. Kriege, Petra Mutzel |
| 2014 | ICDM | Explicit Versus Implicit Graph Feature Maps: A Computational Phase Transition for Walk Kernels. | Nils M. Kriege, Marion Neumann, Kristian Kersting, Petra Mutzel |
| 2014 | ISAAC | Enumeration of Maximum Common Subtree Isomorphisms with Polynomial-Delay. | Andre Droschinsky, Bernhard Heinemann, Nils M. Kriege, Petra Mutzel |
| 2014 | IWOCA | On Maximum Common Subgraph Problems in Series-Parallel Graphs. | Nils M. Kriege, Florian Kurpicz, Petra Mutzel |
| 2014 | MFCS | Finding Maximum Common Biconnected Subgraphs in Series-Parallel Graphs. | Nils M. Kriege, Petra Mutzel |
| 2014 | WALCOM | SAHN Clustering in Arbitrary Metric Spaces Using Heuristic Nearest Neighbor Search. | Nils M. Kriege, Petra Mutzel, Till Schfer |
| 2012 | ICML | Subgraph Matching Kernels for Attributed Graphs. | Nils M. Kriege, Petra Mutzel |
| 2011 | ICDE | CT-index: Fingerprint-based graph indexing combining cycles and trees. | Karsten Klein, Nils M. Kriege, Petra Mutzel |
| 2009 | GD | Scaffold Hunter - Interactive Exploration of Chemical Space. | Karsten Klein, Nils M. Kriege, Petra Mutzel, Herbert Waldmann, Stefan Wetzel |