| 2025 | KDD | MentalChat16K: A Benchmark Dataset for Conversational Mental Health Assistance. | Jia Xu, Tianyi Wei, Bojian Hou, Patryk Orzechowski, Shu Yang, Ruochen Jin, Rachael Paulbeck, Joost B. Wagenaar, George Demiris, Li Shen |
| 2024 | ICCS | EsmTemp - Transfer Learning Approach for Predicting Protein Thermostability. | Adam Sulek, Jakub Jonczyk, Patryk Orzechowski, Ahmed Abdeen Hamed, Marek Wodzinski |
| 2022 | GECCO | A comparative study of GP-based and state-of-the-art classifiers on a synthetic machine learning benchmark. | Patryk Orzechowski, Pawel Renc, William G. La Cava, Jason H. Moore, Arkadiusz Sitek, Jaroslaw Was, Joost B. Wagenaar |
| 2021 | GECCO | Rapid prototyping of evolution-driven biclustering methods in Julia. | Pawel Renc, Patryk Orzechowski, Aleksander Byrski, Jaroslaw Was, Jason H. Moore |
| 2021 | GECCO | EBIC.JL: an efficient implementation of evolutionary biclustering algorithm in Julia. | Pawel Renc, Patryk Orzechowski, Aleksander Byrski, Jaroslaw Was, Jason H. Moore |
| 2021 | ICCS | Socio-cognitive Evolution Strategies. | Aleksandra Urbanczyk, Bartosz Nowak, Patryk Orzechowski, Jason H. Moore, Marek Kisiel-Dorohinicki, Aleksander Byrski |
| 2020 | EUROGP | Benchmarking Manifold Learning Methods on a Large Collection of Datasets. | Patryk Orzechowski, Franciszek Magiera, Jason H. Moore |
| 2019 | GECCO | EBIC: a scalable biclustering method for large scale data analysis. | Patryk Orzechowski, Jason H. Moore |
| 2019 | GECCO | Strategies for improving performance of evolutionary biclustering algorithm EBIC. | Patryk Orzechowski, Jason H. Moore |
| 2019 | GECCO | Mining a massive RNA-seq dataset with biclustering: are evolutionary approaches ready for big data? | Patryk Orzechowski, Jason H. Moore |
| 2018 | GECCO | Where are we now?: a large benchmark study of recent symbolic regression methods. | Patryk Orzechowski, William G. La Cava, Jason H. Moore |
| 2018 | GECCO | EBIC: a next-generation evolutionary-based parallel biclustering method. | Patryk Orzechowski, Moshe Sipper, Xiuzhen Huang, Jason H. Moore |
| 2018 | PSB | Mapping patient trajectories using longitudinal extraction and deep learning in the MIMIC-III Critical Care Database. | Brett K. Beaulieu-Jones, Patryk Orzechowski, Jason H. Moore |
| 2018 | PSB | Considerations for automated machine learning in clinical metabolic profiling: Altered homocysteine plasma concentration associated with metformin exposure. | Alena Orlenko, Jason H. Moore, Patryk Orzechowski, Randal S. Olson, Junmei Cairns, Pedro J. Caraballo, Richard M. Weinshilboum, Liewei Wang, Matthew K. Breitenstein |
| 2016 | FedCSIS | QtBiVis: a software toolbox for visual analysis of biclustering experiment. | Artur Panszczyk, Patryk Orzechowski |
| 2016 | ICAISC | Text Mining with Hybrid Biclustering Algorithms. | Patryk Orzechowski, Krzysztof Boryczko |
| 2013 | ICAISC | Proximity Measures and Results Validation in Biclustering - A Survey. | Patryk Orzechowski |